Ll_transcript_417216

• Id Trinity: TRINITY_DN32504_c0_g1_i1
• Name Transcript: Ll_transcript_417216
• Sequence: AAGATCGAGTTCATTCTAAAACCCTACGCTTTCTGTTCTTCCCTTCATCCATTATTATTTCCTTCAATGACTCATCCCAATTCCGATCAATTCCACCGCC GCATTCTCTCATACACGGCGGTGCACCCATGCGAAGATATATCTCCGGCAACCCTTCTCGCTTCTCTCATCACTCTCTCACAAAACATATGCCACTTCCA ACATAACTTCTTCCAAACCCAAAAACGAAACGCAAGAGAAACGATACGTCAAGTTAATATTATCCTCATATTTCTCCACGAAATTCAAAGTCGTCGCCTT TTTCTCTCTGACTCCATAATCCTCTCTCTTTCAGAACTCCACTTCACGTTCCAAAAAATCCGTTTTTTGATGCAGGATTGTACTCGTGAAGGTGCAAGAC TATTGCTGTTAGCGAAGTCCAGCCACGTTGCTTCTCAATTCAGGTCACTTATTCGTGATTCTTCCACTGCTCTTGATGTTTTACCTCTCAATAGAATCGA GGTGTGTGATGAAGTTAGAGAGTTAGTAAAACTTGTAGTAAAGCAAGCGAGGAAAGCTAAGATGGAACTTGATCCTAACGACGAACGTGAAAGTAAAAAA CTTGATTCAATTTTGCGACAGTTTGAAAAGGGAATCGAACCCGACGTGAAAACCATGCAGGGAATCCTTAAATACCTCGAAATCAAAACATGGTGTGATT GTAATAAAGAGATTAAACTCTTGGAAGATGAAATTGAGTTTGATTCTGATGAGCGAGAGGTTCCATTATTAAGCAGCTTGATGGGGTTCATGAACTACTC CAGGGTAGTCATATTCGAAAAACTAGATTTTTTCAATACTGATCAATCATCATCTAGGTGCAGCACAGAGATGATGATAACATGTATAAATCTCCAAGAT TTTCGATGTCCAATTTCCCTCGAACTCATGACGGATCCTGTAACCGTTTCAACCGGTCAAACCTACGATCGAGTCTCAATTAAAAAATGGCTCAAAGCAG GGAACAAGATATGCCCCAAAACAGGGGAGAAGCTAACAAACACAGAATTAGTCCCAAACACAAGTATTAAAAGACTTATCCAACAGTTCTGTATTGATAA TGGTGTCTCTCTATCAATCTCAGGCAACCGCGACATATCGAGGACTATCGTGCCAGGTAGTTCAGCTGCAGCGCACGCCACGCAGTTTCTTTCATGGTTT GTTACTCATAAACTCGTGTTCGGAACTGAGGAGCAGAGGAACAAAGCTGCTTATGAAATTCGCGTGCTTACAAGGTCTAATATTTTCAATAGGGCATGCT TGATTGAAGTTGGAACTATCCCTCCTTTGCTTGATCTTTTGGGAAGTAATTGTAAATCAACACAAGAGAATGCAATATCTGCTTTGTTGAAGCTCTCGAA GCACGCCATGGGACCAGGAAATATAATGGAAAACCGTGGTTTAGTACCAATTCTTATGGCTCTCAGGAAAGGGGTTACTTTGGAAGTTCGCCAAACTGCA GCAGCTATAATATTTTATCTTTCTTCAGTAAAAGAATATAGAAAAGAAATAGGAGAAAACCAAGAAGTGATTCCGGGTTTAGTAGAATTGGTCAAGGAAG AAACAAGCCATGGGAAAAAGAATGCAGTGGTTGCAATTTTTGGGCTTCTTTTGCATCCTGCCAATCATATCAGAGTGATTCAATCAGGTTCTGTTCCTGC ACTTGTTGCAACTTTGGCCTCCTCAGATAAACAAGAACTTATAACTGAATGTTTAGCTGTTCTTGCTGTGCTGGCTGAGAATTTTGATGGAGCAAATGCT ATATTGAAAGCTAATACTCCATTGCAGTTAATCACTGGGCTGTTGCAATCTGTTACATCTAATGCAGGGAAAGAACACTGTGCTTCAATTCTGTTGTCTC TTTGTGTTAATTTTGGTGCTGATGTAGTTGGTGTTCTTTCTAAGGACACCACATTGATGCCTTTGCTTTATTCACTTCTAACTGATGGTACTTCTCATGC TTCCAAAAAAGCACGGTTTCTTATCAAGGTTCTGCATGAGTTCAATGAAACAAGAGCTTCTAGTGCATTGAAGGGTTCCTCAATTCCACAGGAACGAGCC CCTCGAATTTGCTTTGATGAGAGGGTTTGAAGACTTTGTTTCTTTGTGGTTTCATGTAAATACATACAAATATTTTATTCTGTAGTTACAGTAGCATTAG TTTCTCTTGGCAAAATTTTGGATTTGTGAAATTGGCTCCATATTTTTTACCCAGTGAGTTAATTTCAATAAGTTAGCTTTTAGCTTGGTTTGGAAATTTT TTGAATAGCTCATTTTACTGTTATCAATTAAATTGGTGTGAATTTATACAAAGATATCATGTATCAATTGTCTGGTGTTCTGTTTTTATTTTCTATTTTG TC
• Tissue: pods
• Gene name: LI_gene_126186;
• Additional information: details;

Expression of Ll_transcript_417216

FPKM

• PAB: 52.2
• PNAB: 1.1
• PS1: 0.8
• PS2: 0.1
• PS3: 0.4
• PW1: 4.7
• PW2: 7.2
• PW3: 9.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_417216

• Blastp: U-box domain-containing protein 18 from Arabidopsis with 40.92% of identity
• Blastx: U-box domain-containing protein 18 from Arabidopsis with 40.77% of identity
• Eggnog: Ubox domain-containing protein(ENOG410YCUS)
• Kegg: Link to kegg annotations (AT1G10560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462526.1)
• Pfam: U-box domain (PF04564.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;