Ll_transcript_477482

• Id Trinity: TRINITY_DN3327_c0_g1_i1
• Name Transcript: Ll_transcript_477482
• Sequence: TGAAATTAATCAACCATCTGAACGTCTTACAGAAACACAATCCACCGATCAAACTTATAAATAAAGCTCGCCCGCTTAATTTTTCCAGAATCAACAGAAC TCTCACATATCCTTACCAACTTCAAATTTCAAACAGAGATTTTGAGCAACAATGTCAGGGCGAGGTAAGGGAGGAAAGGGATTAGGAAAAGGAGGAGCAA AACGACACCGTAAAGTGTTACGCGATAACATTCAAGGAATAACAAAACCAGCGATTCGTCGTTTAGCGCGTAGGGGTGGTGTGAAACGTATAAGCGGACT TATATATGAGGAGACACGTGGCGTGCTTAAGATCTTTCTAGAGAATGTGATTCGTGACGCCGTTACTTACACAGAGCATGCTAGGCGTAAGACCGTTACT GCAATGGATGTTGTTTATGCACTTAAGAGGCAAGGGAGAACCTTGTATGGATTTGGGGGTTAGGGTTTTCAATTTTACTCGTTTCTTATTGTTATGTTGT CGAGAAACTAAAACTGGTAAGGATTTGTTGGTTTTGTTTTGGAATCAATGGTAATTAAAATTTTGAGCCATTTAATATTTCAACTATATGTTCTGCACCT ATCTTTTTTGGATCAAGTGTTTTACTATGCAGTACGGCCTTATTTATTTAAACTTAGCACCGATGTATACTAAATGTGTGGTTAATTCCTTAAAGATATT AATTTGCTACGGTTGGGTGCTTTTATTTTTTAAGGCAATGTTATTAAAACTGTACCAGTTATCAAATCAATTAGATAAAAAA
• Tissue: pods
• Gene name: LI_gene_126422;
• Additional information: details;

Expression of Ll_transcript_477482

FPKM

• PAB: 0.9
• PNAB: 54.4
• PS1: 25.8
• PS2: 19.7
• PS3: 24.3
• PW1: 10.5
• PW2: 6.4
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_477482

• Blastp: Histone H4 from Soja with 100% of identity
• Blastx: Histone H4 from Soja with 100% of identity
• Eggnog: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling(COG2036)
• Kegg: Link to kegg annotations (100305586)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_007162656.1)
• Pfam: Centromere kinetochore component CENP-T histone fold (PF15511.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;