Ll_transcript_448727

• Id Trinity: TRINITY_DN33376_c0_g1_i1
• Name Transcript: Ll_transcript_448727
• Sequence: AGCAGCACCCTGATGAAAATGTGGTGTTTGCTGAGTTCTCCAAGAAGTGTGCTGAGAGGTGGAAGACCATGCTGGACAAGGAAAAGAAGCGGTTCCACGA GATGGCTGAGAAGGACAAGAAGCGGTACGACACCGAGATGCAGGACTACGTTCCTCCTGTTGGTGAGAAGCGTGGCAAGAAGAGGAAACAGATCAAGGAC CCCAATGCGCCCAAGCGCTCATTATCTGCGTTCTTCTGGTTCTGCAACGACGAGAGAGGAAAGGTGAAGAGCGTCAACCCTGAGATGACTGTCGGAGAGA TCGCCAAGGAGTTGGGAAGAAGGTGGTCCGATATTTCCCCTGAGCTCAAGAACAAGTACGAGCAGATGGCTGAGAAGGACAAGGCCCGATATGAAAGGGA TATGACAGCATACAAGAAGAAGC
• Tissue: pods
• Gene name: LI_gene_126449;
• Additional information: details;

Expression of Ll_transcript_448727

FPKM

• PAB: 0.6
• PNAB: 0.2
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_448727

• Blastp: High mobility group protein DSP1 from Sophophora with 79.86% of identity
• Blastx: High mobility group protein DSP1 from Sophophora with 79.86% of identity
• Eggnog: high mobility group(COG5648)
• Kegg: Link to kegg annotations (Dmel_CG12223)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_013466118.1)
• Pfam: HMG-box domain (PF09011.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;