Ll_transcript_382640

• Id Trinity: TRINITY_DN34482_c0_g1_i1
• Name Transcript: Ll_transcript_382640
• Sequence: GAGAGAGAGAGAGAGAGAGAGAGAAATGTCACTGATAACTGCCGAGGTTTCAGGTTTCCAACAACTAAGGTAGGTTAACTGAAACGTTGACATTTCTCAA ACCCATGTTTCCATTAATACTATTGTTGTTTCCACACTCTTACTCTTGCAAAACCCAAGACTAAATTTTGAATCAATTGGGTTCCCCTTTTCTATTTTTC GGTCCCTCTTCTTTTCTTTCTTTTCATCTTCTCTCCAGTGTGCTCAATTGTTTGTTTTCTACAAGGTCTGAGTTGGGTTTAATCCCAAAACATGCAAAGA TTATAACTTTGTTCAAAATCTGCAGCAAAGATTGAAACTTGAAACTCATTCTCCTGCTTCAAAGCACAGAATTGTTTTAGAAATTTTTAATTTGGAATGC TGTATTCTCAAAATGCATTGGGTAAAGGTTCACTCTCAAATCCATCAGAGCAATGGTGCTATCACAAGCCCTCCAATTCTCTCTCCATCTTATTCATCTT CAATTGCTTCTTCTTCTGGGAATAAAATAAGTCCTGCAATTCTTTTCATGATAGTGATTTTAGCTGTTGTATTTTTCATCTTGGGTGCCCTTCACTTGCT TGTTAGATTTCTCACAAAGCACAGATCTTCCTCTTCATCAATTTCTCAATCCAATAGGTACAATCACATGTCTGAATCTGATGCTTACCAAAGACAATTA CAGCAACTATTTCATCTTCATGATTCAGGCTTAGATCAGGCTTTCATAGATGCTCTTCCAGTTTTCCTTTATAAAGATATTATAGGGTTGAAAGAGCCAT TTGATTGTGCAGTTTGCCTTTGTGAGTTTTTGGAAAAAGACAACCTCAGATTGCTTCCAACTTGCAATCATGCTTTCCACATTAACTGCATAGACACATG GTTGTTGTCTAATTCAACTTGTCCTCTCTGTAGAGGGACTCTTTATGCACCGGGCTACTCCTTTGAGAACCCGATTTTCGACTTCGAGGGTCCAAATGAG GAAGATGGGGGTTCAGGAAGTGGTGGGGGAGGGGTTGCTTTTGTTAACAAACCTGCAGAGAATCACATAATGAGTGGGAAAAGGGTGTTCTCTGTTAGGC TTGGAAAGTTCAGAAGCTCAAATAATGGAGATATGGTAGAAAGAATTGAGGGAGAGAGTAGTAGCAATGTTGGTAATTTGGATGTAAGAAGATGCTATTC AATGGGGTCTTTTCAGTATGTGGTTGCTGATTCAGATTTGAGAGTGGCTTTATGTCCTCATAGAGGTGATGGTGGTAGCAGTAACAGTATGAGACATATC AAAGGAAGAGCAGGCACAATTGGAAATTTCTCAAATGATAAGGATGTTGAGGACAAAAAAATCAACATTGCAAGGAAAGGTGAAAGCTTTTCTGTTTCCA AGATTTGGCAATGGTCTAGGAAGGATAAGTTAACAAGTTCATCAGAGACAAATTTCAATAATTCCACTGCAACTTTGCCTTGGATGAATAAAGCCAGAGG TACATGAAGCTATTCAGTATTTTGTATTTTAACTACTTCCACATTTTCAATGAATCCATTTGTAATTTGTTGACATCCTTTTTATCCCATACTCATATTT TACCCCTTTTTTAGAGATCAAACTGTTAGATCATGCCATAAAACACTTAATCAAACAATGTTCTTTGAATGAGAGTTGTTCTTGTGTGTAGGGAAAATAA CTTCTTTTATACAAAAATCCTATTGTGGGTTTGTAGTATGTCCTATCAATAGGATTTTGTAATATGTCCTATCAATATGACAAGAATCAAACACCTGTTT TGCTCTTACAAGCCATTGGAAGCTCTATGTAGTAGAGGTTATAAGGAACATGAAATGAAAAGAGTAAAGTTGGAACATAGAAAAAGTACTTA
• Tissue: pods
• Gene name: LI_gene_126785;
• Additional information: details;

Expression of Ll_transcript_382640

FPKM

• PAB: 1.5
• PNAB: 9.7
• PS1: 8.4
• PS2: 8.7
• PS3: 12.7
• PW1: 7.1
• PW2: 8.7
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_382640

• Blastp: RING-H2 finger protein ATL46 from Arabidopsis with 49.61% of identity
• Blastx: RING-H2 finger protein ATL47 from Arabidopsis with 61.41% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT5G40250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445475.1)
• Pfam: Anaphase-promoting complex subunit 11 RING-H2 finger (PF12861.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;