Ll_transcript_435547

• Id Trinity: TRINITY_DN34592_c0_g1_i1
• Name Transcript: Ll_transcript_435547
• Sequence: ATCACCTTCTGTTTTCGCTATCATTCAATACATCTCCTTTTCAGATGGTTTCTTCAAACTATAATACTTTCTAGGAAACTCACATATTGACTCACAACAC CCCCATTCCTTATACCCTTTATACCTTATATATAAATACTTGGGCAAGTTGAACATTTTTAATCCATCAAATATTCAGCTACATGAACAAATTAAACATG GTTGGTGTTAAGAACAACAATGTCATAATGAAGAGAAATGGGCAAGGCAAAAGGAACAAAAAGGAAATCAAAGTCACATATATTTCAAGCCCCATGATGT TCAAGACTAGTGCTTCCAACTTCAGAGCTCTTGTGCAAGAACTCACTGGCCAAGACTCTAATGTTGCAGAAATGTTCATGGAAGTACCAAATGAAGTTGT GGGTTTTGTTCACAACAAGGGCTTAATGCAAGAAAGAAGTGAGGCCTATTTAACAGATTATATAGAGTTTGATTTGTTGAGATTTGATATGTTATAGAAT TTTATGTATATGTATGTATAGGTTAGTGGCAGATTGAAGATGAAGTATTTGTATGTATCAATATGCCATTTTTTGTTTTCTATTGATTTTGATGTACTCT AAGTTGCTTGCAAAGTTGATTAGAAAAGATGAATATATGCATATTTAAGTATATGTTATCATTTTATAAATTCTCTTACACTATAAAAAAAAGCAATATG TTATAAAGTGATAATTTTTTTTATAAATTATAAAA
• Tissue: pods
• Gene name: LI_gene_126815;
• Additional information: details;

Expression of Ll_transcript_435547

FPKM

• PAB: 117.3
• PNAB: 2
• PS1: 0.5
• PS2: 0
• PS3: 0
• PW1: 15.1
• PW2: 17.5
• PW3: 7.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435547

• Blastp: Sigma factor binding protein 1, chloroplastic from Arabidopsis with 52.83% of identity
• Blastx: Sigma factor binding protein 1, chloroplastic from Arabidopsis with 69.7% of identity
• Eggnog: Sigma factor binding protein(ENOG410ZFI0)
• Kegg: Link to kegg annotations (AT3G56710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_006578424.1)
• Pfam: VQ motif (PF05678.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;