Ll_transcript_395978

• Id Trinity: TRINITY_DN3489_c0_g1_i2
• Name Transcript: Ll_transcript_395978
• Sequence: TTAAGTTTTCTTCAATAAAAATTAATTTTATACCAAAAATCGCTTAACAGCTTTCAAAGATTGTATACCTAGTGTAACAAAAAGAAAAGATTGGATCTCT GATCGCCACAAATCCCTAAATATCTTCCGATTTTGCAGTTCTCTTCACATCTTATATCTACCATCTCCTTCTTCATCTCACCATCTTCAAACCCAATTGT TCTTTTCCCGAGAACAACATATATGCCAACTTAATTCGGATCTTGTTGCATTTGGAATGTGTTGTTGATGGTATAAACCCGAAGAAAAAGAAGTGAAGTT GTAATGGAGATTAATATGGACGAAGAGCCGTTGAACAATATAGAAGAGCGTATTAGACGTCTTGAAGGAGTAATTTTCAGAGCTAGGCAGCGTCAGAGGT GGAGACAGAGTCACACTCCGAATCAAATAACTAACTTCGCCGGAGAGTTGATAACAACAGCTAATGTTCAAGATGATGGCAGGGTGCGCCGGGAAGAGGT TGGGATTGATGCTGAAGCTGGAACTGCCGGTTGTGGGAAAATTGGCAAAAGGAAAGCTACCTTCTTAATTGCTAACGCGTTGAAGACTGAAACGTATACC AGTAAGGCACAGGGGTGCGGTGGAAGTTTGTTTGATTGTAATATATGCTTGGGTATGGCACGAGATCCGGTTTTGACCTGCTGTGGTCACCTGTTTTGCT GGCCATGCTTCTCTCAGTTGTCATATGCTTATTTGGAAGCAAAGGAATGTCCGGTATGTAAAGGAGAGGTCACGGAAACTGGCGTTACCCCAATTTATGG CAACGGAGGTGCCAATAACAGTGATCAGTTGGGATTGGAAGCAACTGGCTTCAGAGTTCCTTCTCGACCTCGTGCACGTAGAGTTGAGAGTGTTAGGCAG TACCTCAGAAACTAGGGCCCTTCTACAATCCATGAGATGTCGGGGTTTGGTCTAAACCGTAAACCCTAAACCCGAGTTTAGCTGGTAATCCCCAATAGTG CAACTGATAAAGCTAAGGTTTTAGACTCTCAATGTGGCCAAAATAACGAACATACTTCTTCCCATTTGTAGAGTATATAAATTGAAGGGTCGATATGATA CATTGTTACTCGCTTTAGAGTATCCTTAATGTGTTATGAATTGTTATGCAGTTAGAGGCTATGTGAGAGATTCATACATTATTAATTCATCTTTTGATTT ATAATAACATCATACTTCTTCTTCAATAGTTTGGTTCCAATCAAAAGAATCATGTATAAAC
• Tissue: pods
• Gene name: LI_gene_126917;
• Additional information: details;

Expression of Ll_transcript_395978

FPKM

• PAB: 10.1
• PNAB: 7.4
• PS1: 11
• PS2: 6.4
• PS3: 11.6
• PW1: 8.3
• PW2: 7.6
• PW3: 9.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_395978

• Blastp: E3 ubiquitin-protein ligase RMA2 from Arabidopsis with 44.33% of identity
• Blastx: E3 ubiquitin-protein ligase RMA2 from Arabidopsis with 44.33% of identity
• Eggnog: Ring finger protein(ENOG4111IHV)
• Kegg: Link to kegg annotations (AT4G28270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425558.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;