| Id Trinity | TRINITY_DN35353_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_322341 |
| Sequence | CTTTTCTAGTACAACAAAAGTACCATAGAATCTATAATAGATGGGTTCACATATCACATTTTCACTAATATTGCACCTTCTATTGTTAATTTTGTGTTCA TTGAATCAACCAAGCTTTGCATTCACTTCACAAGAGTACTATGAGGCTCTTGAGAAATCCATTCTATTCTTTGAGGGACAAAGGTCTGGAAGATTGCCCT CCAATCATAGGGTCACTTGGAGGGGAGATTCTGGATTGTATGATGGCTCTTCTTATAATGTGGACCTAGTTGGTGGTTATTATGATGCTGGGGACAATGT AAAATTTGGGTTCCCAATGGCCTTTAGCACAACATTATTAGCATGGAGTGTGATTGAATTTGGAAGCTCAATGCAGAAAGAGGTTGAAAATGTTAGAGCT GCTATCAGATGGAGCACAGATTATCTTCTTAAGGCAGCTACCACCACTCCTCACACATTATATGTCCAAGTAGGAGAGCCAAACATGGATCACCATTGTT GGGAAAGGCCTGAAGATATGGACACTCCTAGGAATGTTTACAAAGTATCAACTCAAAACCCAGGATCTGATGTAGCAGCAGAAACTGCAGCAGCATTAGC AGCTTCTTCATTAGTATTCAAAGATTCTGATCCCACTTATTCCTCTATATTGCTGCAAACAGCTATTCAAGTGTTCAATTTTGCAGACAATTATAGGGGA TCTTATAGTGACTCTCTTAATTCTGTGGTGTGTCCATTCTACTGCTCTTACTCTGGATACCATGATGAGCTTCTATGGGGTGCATCATGGATTTATAAAG CCTCTGGAGATAGTTCATATATTCAATATATTAGATCCAATGGCCACACATTAGGTGCTGATGATGATGTTTATTCCTTCAGTTGGGATGATAAGCGAGC TGGTAACAAAATCTTGCTTTCTAAGGAATTCTTGGTGGAAAACTCAGAAGAATTCGAATTGTATAAGGCACATGCAGACAATTTCATATGCTCTCTCATT TCTGGTACACCTGCTTTTCAAGCTCAATACACCCCAGGGGGTCTTCTATACAAAGGGAGTGAAAGCAATTTGCAATATGTGACAACAACATCTTTTCTTC TTTTAACATATGCTAAGTACCTAAACTCAAATCAACAAAATGTTGTCTCATGTGGAACAACAACATTAACTAGACACAACATCATATCACTAGCAAGAAC ACAAGTTGACTACATTTTGGGCAAAAATCCTACAAATATGTCTTATATGGTTGGTTTTGGAGATAAGTATCCAAAACATATTCACCATAGGGGTTCCTCT ATGCCTTCTATTCATAATCATCCTCAGAAAATTTCATGTAATGATGGGTTTCAATATTTTCATTTAGGGTCACCTAATCCAAATGACCTTGTTGGAGCCA TAGTTGGAGGTCCTGATAGCAATGATAATTTTTCTGATGATAGAAATAATTATCAACAATCTGAGCCAGCAACATATATTAATGCACCATTTGTAGGTGC TCTTGCATTTTTCTCTTCCAAACCTTAGGTTTATTTTTTTTAGTGAAGAAATGTGACCATTTATATTTGGTGTTAGACCTACATTTCTTTACTTAGGCAA ATCATTTCCACTATTTAAGTAATGTACCATGAACATTTTCATTAAGGGGTGCTTGTTTTAAGGTCTAAAGTTACATTGTAAAGAATTAATATTGGATTTA ACATGCCACTTAGCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_127114; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_322341
| Blastp | Endoglucanase 1 from Persea with 73.39% of identity |
|---|---|
| Blastx | Endoglucanase 1 from Persea with 75.59% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003552557.1) |
| Pfam | Glycosyl hydrolase family 9 (PF00759.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |