Ll_transcript_495711

• Id Trinity: TRINITY_DN35415_c0_g1_i1
• Name Transcript: Ll_transcript_495711
• Sequence: AACACACTTTGTGGCTCCTGAATTTTTTTTAATGACATACCATTGTAACAAAGAAAACCCTAAATAACTCATTCGCCGTTTTCTTTTGATAAATAGTCAT TCGCCGTGTTTGATTGCCGCCATTGCCCAATTCTCTCCCAACCCTTTGAAGCTCGCACCCGAAAGAGAGTTGCAAAATGCAGTCTACTGAAGCATTGTCT GCCATGGAGGTTGAAGCTGTTGCATCTGAACCTAAACTTTTGCCACCCAAGCCAGAGTTTGCTCCTTTGAAACCTCATGAGATGTCTGATGGTCAGGTTC AGTTCCGCAAGGTGTCTGTTCCACCACATCGTTACACTCCTCTCAAGAAAGCTTGGATGGATATCTATACCCCTGTTTATGAACAGATGAAGATCGACAT CCGAATGAATTTGAAGGCTCGGAAAGTTGAGCTGAAGACAAGGCATGATACACCTGATATCAGTAACCTGCAAAAATGTGCTGATTTTGTCCATGCTTTC ATGCTGGGCTTTGATGTCATAGACGCCATTGCTCTTCTGCGTTTGGATGAACTCTATGTTGAGTCCTTTGAGGTCAAGGATGTGAAAACACTTCGTGGTG ATCACTTGTCCCGTGCTATTGGACGATTATCTGGTAAAGGTGGTAAAACGAAGTTTGCAATTGAGAATGCTACGAAGACCAGGGTCGTGATTGCTGACTC CAAAATTCACATATTGGGATCTTTCGCCAACATTAAGATTGCAAGGGACTCTCTTTGTAGCCTAATCATGGGATCTCCTGCAGGAAAGGTGTACTCGAAA CTTAGAGCAGTTACTGCTAGATTGGCAGAGAGGTTTTGATCCTCTCTTCATGATAGCATCATAAGAACTTTTTTATGTTCCATAGAATATTCTATAATTT ATATTTGAGATCCATTTGTGATGAGGATGAGTTATTGTAACGAAGCCGTGTCAGTGGTTACTCTAATTCATCCAATTTTGGATGTCAACTCAGCAATTTA TCAATTTTGAACCTAAGTTACTGATGTAACAGCATGGCTGTGAAGTTTTGCTTGTGAACATGGATACATTATCATGAAGTACAGTTCTTTATCAATGTTT GCTGCTTTTGTTAAGGATCAATAGACAATCCATTAGTAATACTGTTTCTTGTTTCTTTTGGTCTTCAGTAGAATAGTGTTTTATCTTCAAATGCTCGAGC TTTTTCTGTATTTCTGAAATTTATTTCTATTTAACATAAAAGTCGAGTGTGTATATACAG
• Tissue: pods
• Gene name: LI_gene_127174;
• Additional information: details;

Expression of Ll_transcript_495711

FPKM

• PAB: 7
• PNAB: 23.5
• PS1: 10.6
• PS2: 14.8
• PS3: 16.9
• PW1: 11.5
• PW2: 13
• PW3: 11.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_495711

• Blastp: RNA-binding protein pno1 from Sophophora with 60% of identity
• Blastx: RNA-binding protein pno1 from Sophophora with 58.67% of identity
• Eggnog: Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (By similarity)(COG1094)
• Kegg: Link to kegg annotations (Dmel_CG11738)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447032.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;