Ll_transcript_495712

• Id Trinity: TRINITY_DN35415_c0_g1_i2
• Name Transcript: Ll_transcript_495712
• Sequence: AACACACTTTGTGGCTCCTGAATTTTTTTTAATGACATACCATTGTAACAAAGAAAACCCTAAATAACTCATTCGCCGTTTTCTTTTGATAAATAGTCAT TCGCCGTGTTTGATTGCCGCCATTGCCCAATTCTCTCCCAACCCTTTGAAGCTCGCACCCGAAAGAGAGGTACTTCTCCCTTTCCCTTTCCACAATCTCT CTTATGAATCTCTTTTTTCTCTCAATATCACAAAAAGCTTTCTCACTATTACTTACCATAATTTCTTCTCTTTTTTATAATCTTCATCTCTTATTTGATC CAATTATTATAACTATGTTTTCTGTCTAAACTGTGATGTTAAACATGAAGGGATTAAAAGGGTTTGTTTTGTATGTTGATTTTTTTTAATAAATCAAACA AGTGCTCTAGTTCCCATCATGCTTTGTGTTGTCCCTGTGAAATTGTTTCTGCACTTTATGTGAATGTTCTTGTCAGTATCTGGTTTCATGCAGAATGCTC TAGTTCACAAGTTATATATGAGGTGAAGTGTTATTGCTTGATGTATTACCATGTTTTAGATTATTCATGTTTGCAATTTGTTGGATATATGAGATAGTAA TTGTATTGGCTCAAAGTTTTGTATTTTATGTAATCTTCAACATGATAATATAATCTCATTACTGTTCTCTTCAATTTTGTTATTGAACTGCTACTATTTA GAACTGAAGGAGTAAGATCTGGCTTATGAACATGTATTTTATATGAAGGTTGATTTTGTGTTTTCCTTCGAACAGTTGCAAAATGCAGTCTACTGAAGCA TTGTCTGCCATGGAGGTTGAAGCTGTTGCATCTGAACCTAAACTTTTGCCACCCAAGCCAGAGTTTGCTCCTTTGAAACCTCATGAGATGTCTGATGGTC AGGTTCAGTTCCGCAAGGTGTCTGTTCCACCACATCGTTACACTCCTCTCAAGAAAGCTTGGATGGATATCTATACCCCTGTTTATGAACAGATGAAGAT CGACATCCGAATGAATTTGAAGGCTCGGAAAGTTGAGCTGAAGACAAGGCATGATACACCTGATATCAGTAACCTGCAAAAATGTGCTGATTTTGTCCAT GCTTTCATGCTGGGCTTTGATGTCATAGACGCCATTGCTCTTCTGCGTTTGGATGAACTCTATGTTGAGTCCTTTGAGGTCAAGGATGTGAAAACACTTC GTGGTGATCACTTGTCCCGTGCTATTGGACGATTATCTGGTAAAGGTGGTAAAACGAAGTTTGCAATTGAGAATGCTACGAAGACCAGGGTCGTGATTGC TGACTCCAAAATTCACATATTGGGATCTTTCGCCAACATTAAGATTGCAAGGGACTCTCTTTGTAGCCTAATCATGGGATCTCCTGCAGGAAAGGTGTAC TCGAAACTTAGAGCAGTTACTGCTAGATTGGCAGAGAGGTTTTGATCCTCTCTTCATGATAGCATCATAAGAACTTTTTTATGTTCCATAGAATATTCTA TAATTTATATTTGAGATCCATTTGTGATGAGGATGAGTTATTGTAACGAAGCCGTGTCAGTGGTTACTCTAATTCATCCAATTTTGGATGTCAACTCAGC AATTTATCAATTTTGAACCTAAGTTACTGATGTAACAGCATGGCTGTGAAGTTTTGCTTGTGAACATGGATACATTATCATGAAGTACAGTTCTTTATCA ATGTTTGCTGCTTTTGTTAAGGATCAATAGACAATCCATTAGTAATACTGTTTCTTGTTTCTTTTGGTCTTCAGTAGAATAGTGTTTTATCTTCAAATGC TCGAGCTTTTTCTGTATTTCTGAAATTTATTTCTATTTAACATAAAAGTCGAGTGTGTATATACAG
• Tissue: pods
• Gene name: LI_gene_127174;
• Additional information: details;

Expression of Ll_transcript_495712

FPKM

• PAB: 0.2
• PNAB: 0.6
• PS1: 0.3
• PS2: 0.2
• PS3: 0.4
• PW1: 0.1
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_495712

• Blastp: RNA-binding protein pno1 from Sophophora with 60% of identity
• Blastx: RNA-binding protein pno1 from Sophophora with 59.73% of identity
• Eggnog: Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (By similarity)(COG1094)
• Kegg: Link to kegg annotations (Dmel_CG11738)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447032.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;