Id Trinity | TRINITY_DN35418_c0_g1_i1 |
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Name Transcript | Ll_transcript_495690 |
Sequence | TATAGAAAAGAACAAAATCAATTATATTTAATTATTTTAACTAATGTGTTACATCGGTACACAATTTGGAACAAGAGTTTGGACTACTTGTCTAGCTTCC GTATGTTTGTTATCTCTATCTATTGAAACTCGTGTTCCCTCTCTCTCTCTCTCGCTCGCACTCCATTTTCTTACAAATTGAGTCCTCTATGATGGTGATG GGCAGTTCCAGCTTCTTCTCCCCTCTCATCTCCATCTCACACAACCCTCTTCATTCCTCTCTCTTCATTTCTCCCTCTCTCACTAACCGCAGAAAACCCA ATCTCATCGTCGCCAAATCCAACGGCAGCGATTCCGCCGATGCCTCTGACCGTTTCATCTCAGCCCTCTGTTACTTCTACCCTTTCTTTGACGGCGTCCA GTATGGCAAGTATGTCATCACCCAGTTCTACCCTCTCCAAGCCGTTATCCAACCACTTGTACCTGCAATTAGGGTTTTCAAAAGCTTCCCCTTTAATGGC TTCCTCGTCTTCTTCACGCTCTACTTCGTTGTTGTCAGGAACCCTAATTTCAGTAGGTACGTCAGGTTCAACACTATGCAAGCAATCGTGCTTGACGTTC TTCTCATTTTCCCTGATTTATTGGAAAGGAGTTTTAATCCCAAAGGTGGGTTGGGATTGGATTTTATCATGAGTTTGGATAGCACTGTCTTCTTGTTCCT CTTTGTGTCTTTGATTTATGGCTCTTCTTCTTGCTTGTTGGGTCAAATTCCTAGATTGCCCATTGTTGCTGATGCTGCTGATAGACAGGTTCTTTGAATC CTCATGCCCCACTAATACTATTTACTTGTATATCAATTTCACCCTAGTTACTGTGAAACTTTGCATTTCCTCTTCCTTCATAGTTATCCTACAATGTTAT GCAAAATAATATTGTTTCCTTTTCTTTTTTACTTTCTATCTCATGTTCCTGTATTTTTATGACTTTATAAATCAGGAATTTGTTATTCTGGCTTTTAGTT TTTGTGTATTTGAGAATTGAGACAATAACAAACTTATTTGTCTTAATTGTTGATTCATGATTGAATTTGATGTTATATATCTCCGATTCAGCTGAATGGT TGTTGTTTTTAAGCTCCATGTAAATGAAAATTTTAGTTCATATTTGAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_127177; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_495690
Blastp | Protein TIC 20-v, chloroplastic from Arabidopsis with 68.93% of identity |
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Blastx | Protein TIC 20-v, chloroplastic from Arabidopsis with 75.71% of identity |
Eggnog | protein transport(ENOG4111UMD) |
Kegg | Link to kegg annotations (AT5G55710) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460477.1) |
Pfam | Chloroplast import apparatus Tic20-like (PF16166.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |