| Id Trinity | TRINITY_DN35421_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_495739 |
| Sequence | AAAAATAGTCTTAAATTACTAATAGAGTAACTAATTTAACATTATCACCATAGTTTAATCAGAAGGAAAAAAAAGTTGATTGCTGCATAAAGTTTAAAAC TTTTTATTTTTCATCAAATGTCTGAGTTTTTCCCTCTTTTGTCAAGATTTTGTGAATGCCTTAGTTGTTTAAAATCACTGTTAGACCAATCTTTATGAGC ACAGAAAGGTTTGATATTTACTTGGAAATGGAATGCTCAAACACCAAATCATTGAAACCCAACTCAAACATATCAGAAATTGTTACCAAGTTGACCAAAG TATGTACATTGAAATCCATTGGGGTGTTCTCTTCTGAACTTCCCAACCTCCAACACTTGCATAAACCTGTTTGCAATAATGCCCCAATGAGTGAAAACAG CACTGGTGCAGGTGAAGAGACCAGAAACCATGGTCAGAAAATCCATCCTCATCCCATTGAAGTGCTTAAAGGAGAGGGTTCATGTTCTAGTTTAGAGATC ATGAAGATATTTGACACTGTTTCAGCACTGAAGTTGGCTTATCTTCAGCTTCAACAAGCTCATATTCCTTATGACACACAGAAGATTATTGCTGGTTTTG AACAAGTAGAAGTTGAGTTTGAAAAGCTGTCCAGGTTGAAGCTTGAATATAAGGAAAAGAAATACAAGAAAGAACAGTTCAATGCTGCACTTTTGGGTCT CTTGCAATCTGAACTTGAGGCCAAAGAGAAACTTTTGAAGAAGCTTAAGTCTCTAAACAGTGTTAAAGACTCTAAGATTCTTCGGTTGCAGCAAGAACTT CATGATCTTGAGATGGGGAACAAAAATCTCTTTGAGAAGATTAAGAGGGTCGGTAAAAAGAGGAAAGCAAGTTCTTTTAGTGTTGCTAAGTTCAAGAATG TCTTTGAGGCTGCTTCAAAGTCCATTCATGATTTTTCAAAACCATTTATTGGTTTGATGAAAGCTTCAGGTTGGGACTTAGATGCTGCTGCAAAATGGTT TGACAATGGAGCTGTTTATTCAAAAAGGTGTGACAAAAAATATGCTTTTGAGTCCTACATTGCACATAGAATGTTTCATGGGATTTCATTAACATCTTAT GATGTGAGTGATATTATGAAGTTTGATGACCCCATTGATGCACTGATGGAGAATCCAGACTCAGATTTTTCCAAATTTTGTAGAACAAAATATCTCCTTG TTGTTCATCCTACAATGGAAGAGTCATTCTTTGGGAATTTGGACCAAAGGACTTTCATATTGAATGGCAAGCACCCTAGGACAAAGTTTTATCAATTATT TGCAGAAATGGCAAAATGGATTTGGGTTCTAATCGGGTCTTCTGTATCAATAGATCCCCAAGCAATCATGTTTTCTGTGACCAGAGAAAACATGTTCTGC AGTTTGTATATGGAATGTGTTGAAGATGAAAGAGGTAGTGCAGTTCTATCAGTTGAAGAACAAGCCACCTACAAAGTTCAGTTCATGATCATGCCTGGCT TTAAAATTGGACAGACATTGGTGAAGTCTAAAGTTTATATCTCAAAACATCTCTAGTTCTAATTGTTAGTCTAGTTTGGTTCTAGAACTAAATAAATTCT GTACTAGAGTTTTCTGTTGGTACCTTACCTAGTTACGATAACAATTACTACTAGGTTATGTTAGATCCTAAATCCTCCATCTTTGTGCTTGTGATATTTT GTACTTCCTGATGATTAGATTCTTGGTATATCTAATGACTACTAGTTTTGATAGTCTTTAGTTTCTTTCTTTACTGGGCTGTATTTTGTTTTTCCCTTTC AAATTTCTATATGAATTGTACATAGATGTTTAATTAAAACTTCTATTTAATCATGAAATTTTTGCCTTCTATTTGTTGTGCAATCAGGTGAAAACCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_127181; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_495739
| Blastp | Protein GRAVITROPIC IN THE LIGHT 1 from Arabidopsis with 29.29% of identity |
|---|---|
| Blastx | Protein GRAVITROPIC IN THE LIGHT 1 from Arabidopsis with 30.13% of identity |
| Eggnog | Plant protein of unknown function (DUF641)(ENOG410YCXF) |
| Kegg | Link to kegg annotations (AT5G58960) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419716.1) |
| Pfam | Plant protein of unknown function (DUF641) (PF04859.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |