Ll_transcript_495703

• Id Trinity: TRINITY_DN35437_c0_g1_i1
• Name Transcript: Ll_transcript_495703
• Sequence: TTTCACTTCAATGGAGTGAAGATAAGACTGAGAGATTTCCATGGTTGCTCTGAAACACTGAAACTCACCTCATATGATACTTCTTTCCATAACCCATTCG CATTTTTCCACAATTTTCTATATCCAGTTTTAACTTTTCTATCTGAGTTTCAAGTTTAAAACTTCACACACACACAAATACACTATGTATACCAATATCT CCAAAGCACAAGCATTTCCCTTAGCCTCCAAATTCTCTTCACAAACCAGATGCTTAAATTCACCCCTTACCTTAAAGCTTCAATCTTTGCACCTTACTTC TCATCAGAAACCCTTTCAAAACCCTAATCCGAAGAGCCCAAGCTATAGGTTTGGAAGCTTATGTTCGATGAACCTTGTTAACTCTGTAACTCAATTGCAA CATGGAACCTTGGAAATGGGGAAGATGCTGAATTTTGGTAGAAGATATTGTAGAGGCAGAAGTTTTTCTAGTTCTTATGCTGAAAAGAAACTTCCTTGGT TAGTTTCGGATGAAGGTAAGGAAGATGAAGTGGCGGAAAAAGCGAAAACAGGTAGGGTTAGTAGGTCCTTTCAGAAGGGGTCAGTGAAAAAAGAAGTGAG TGGAACTAGTAAGTCATCTTGGGAACAATCTATTGAAAAGCTAGAGAAAGCAAAATCTGAATTATTTTCTAAGCCCGCGTCGTCAGCGCCAACGGTTACG GTTTCAGCAGCAGCTAGTACAGGAAGGAAGAATCGTTTGGTTGAGAGGGTGAGAGAGAGAAGTGATTATGGTAGGAGGTATGAGAAGTTTGATGATAATG ATGAAGTAAGAGATGAGGAGGAAATGGAAGAGGTGGTTGATGATCCAAGGTGGGATAAGATAAAGAATAGGTTCAAGGGAATGGGGGGAGAAAACGTTGG ACCGGAAAGACAAGAGTTTCGAAGGTGGGACAGGCAGGAAAGTTGGGGTAGAAAGACGTGGAAAGAGGCTACAGAGTCCACTGTACCTAAGATTGTTGGT GAGGGAATCTATGGGGTTGGCCCGGTCTTGGCCGCACTGTCGGCTGGACGAAGAGAATTCTATGCATTGTATGTGCAGGAAGGATTGGATTTGAGTAGCA ACAATAGGAAAAAGAAGGATAAGAAAGGGTTTGAGAAAGTTCTGAAGATTGCTGAAAAGGTTGGTTTGAGTGTAAAAGAAGCATCAAAACATGATCTGAA TATGGTGGTTGATAACCGTCCCCATCAGGGTTTGGTTTTAGATGCTTCACCACTTGAGATGGTGAGAATAATGGAACTGGAGCCTGTTTCTATTGAGGAA GGAAAGGGTTCCCTTTGGGTAGCCTTGGACGAGGTTACCGATCCTCAGAATTTGGGGGCAATAATTAGGTCTGCCTACTATTTTGGAGCTTCTGGTATAG TATTATGTGCCAAGAATTCGGCCCGATTGAGTGGTGTTGTGAGCAAAGCAAGTGCAGGTTCACTTGAATTAATGGAACTTCGGTATTGCAAGAATATGAT GCAATTCTTAGTGTCTTCGGCTGAAAATGGTTGGCGTGTTCTTGGGGGCTCTGTCTCCTCTAAGTCTATTTCTCTAGATGAGGTTGTGCCTGGTGCACCG ACTATCCTTGTTTTGGGCAGCGAAGGCACTGGTTTGAGGCCTCTGGTGGAAAGATCATGTACTCAGTTAGTTAGGATTCCTGGGAACATACCTTCTGACG TAAATACTAATGAATTTGATAGCGAAAGTACTGGCTCGAATTGTGAGAGCTCCGGCAAAGAGTTCCTGTCATTTTTGGCCGTGGAAAGCTTAAATGTTAG TGTTGCAGCAGGTGTGCTTATTCATCACTTGATTGGTAAAAATTTGGCAGAGTCGTCACAAGAAGAATATAGACAGACTAATGCAGCTGAGTGAGACCGC AGGGCCTCGTTTGATATATTCTGCTCTCAATGTCTCTTGATGAACCCTGTTTTATTTCTTTGAATACAGTTGAAGTTATCCTTTTCTTTCATTCGATCGT GTAATCATATTACAATCGTCTTTTCAAGTTGGTCCGTCTACAACTGGAGTTAGTTCATAATTTTGACTGACTTCAGTTTTAAGCCTTAAATTTTGAGGCA ATTAATCAAATCACAGAGAAATGATCACTTGAATAGAGATCTTATCCGGAATTTTCGCCATTGCAACATTAAAATGGCGGCATAATGCACGAGGTTCTCA TCTAGAGGATGTGGGGAGGGTTAATACACTTAGTCTTATCCTTGCAAGTGAAGACGTTATTTCTAGAATTTGAACTCACCTCTGTATCACAAAGCAAACA AGTTTAAATCGAGACTTATCCTTCTTGACGTACTGCTTTTTTGTACAAACCGCACTTTAGGCGAAGTAAAATCTCTCAGACTCCATAACAACGTCTAGCG CATCTACTTGCATTTTGCCTTTTTGCTTTTGTTTGTCAAATAAACATTACTATAGTTACCAACTCCGTTAGCCAGTAATAGTTTGATATGCGTAATGGAA AAAAGTGACATGGTATAGATGGCATGAGTGGGTGGACCATTTGTATAAATAATTTGATAACTTATCAATGACTAGGGAAAGTGTTCATTTTGAATCATCT AAAAAA
• Tissue: pods
• Gene name: LI_gene_127192;
• Additional information: details;

Expression of Ll_transcript_495703

FPKM

• PAB: 2.1
• PNAB: 9.7
• PS1: 5.4
• PS2: 2.4
• PS3: 4
• PW1: 3.8
• PW2: 3.4
• PW3: 3.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_495703

• Blastp: rRNA methyltransferase 1, mitochondrial from Schizosaccharomyces with 36.13% of identity
• Blastx: rRNA methyltransferase 1, mitochondrial from Schizosaccharomyces with 36.01% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPBC1347.13c)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424328.1)
• Pfam: RNA 2'-O ribose methyltransferase substrate binding (PF08032.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;