Ll_transcript_495715

• Id Trinity: TRINITY_DN35444_c0_g1_i3
• Name Transcript: Ll_transcript_495715
• Sequence: TACCAGCATTTCACCAAAATACTAAAAAACCCTCTGCCACCATCAACCTTAACTGTCGGTGACGCTTCTTCAACTGTTTTTCCTCGTTCTCCGAGCTTGT CGGAGAAATCAGTAGTGGCGGCGCGTCGAACAATTTCGTCCTCACCCACAATGCAGCTCCACCGTGTATTCGCGGTGTTTTTAAGCATGTGCTTTGGAAT TGTGCTAGTAAGCGCAAAAGGACTGCCTCACCATGATGTTATCGACTCACATTGGTATCCCGGCACCGCCACATGGTACGGCGAACCAGAAGGAGATGGT AGCACAGGAGGAGCATGTGGATATGGTACACTGGTGGATGTGAAGCCATTGAGGGCAAGGGTAGGTGCGGTGGGGCCGTTTCTGTTCAAGGGCGGAGAAG GGTGCGGGGCTTGCTATAAAGTGAAGTGTCTGGACAAGAGCGTATGCTCCACGCGCGCTGTGACGGTTATAATAACGGATGAGTGCCCTGGGTGCCCTTC TGACCGAACCCACTTCGACCTTAGTGGCGCCGTCTTTGGGCGAATGGCTGTTGCTGGTGAAAACGGTCAGCTAAGGAATCGAGGTGAAATCTCAGTCATT TATCGAAGAACTCCATGCACATATCCTGGCTATAATGTTGCCTTCCATGTTAATGAAGGTTCCACACCTTTCTGGCTGTCACTTCTGGTAGAATTTGAGG ATGGAGATGGGGACATTGGGTCCATGCATATACAAGAAGCAGGGTCAAGTGAGTGGCTGCAAATGAATCATGTATGGGGTGCAAGTTGGTGCATTACTAG AGGACCTTTGAAAGGACCTTTCTCTGTGAAACTAAGCACATCTACTGGGAGAAGTCTCACTGCTAGAGATGTTATTCCAAGAAATTGGTCTCCAAAATCT ACTTATACTTCTCGTTTAAATTTCTTCCCTTAGCCTTTTCAACTTTACAAGCACCACCAAGTCACTTCCCAAAGGGACCAATTACTTAATAAGCAGTTAA AACAAATTTACCAAGTTATTTACAGTGGTATCATTACCATTTTTATTATTATTTCTCTTGTTTTTAGTATGTCTTATCTTTTGTCGTGTGCAACTGTTTC TACTAGATGTTATGTTATTATGTAGCCTTCTCCAAAAAGGAGAGAGAGCGTAGCGTGTAGTGTGTGAATTATAAATGTGTGTACTGGGCCGCTAGGCTTT GAATTAATGAATTAATGAAGTAATGAAATTTAGATCTTGAACTTGATCATTT
• Tissue: pods
• Gene name: LI_gene_127201;
• Additional information: details;

Expression of Ll_transcript_495715

FPKM

• PAB: 0.2
• PNAB: 31.7
• PS1: 16.1
• PS2: 22.2
• PS3: 36.9
• PW1: 35.2
• PW2: 58.4
• PW3: 17.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_495715

• Blastp: Expansin-B3 from Arabidopsis with 70.61% of identity
• Blastx: Expansin-B3 from Arabidopsis with 70.61% of identity
• Eggnog: May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity)(ENOG410YA5Q)
• Kegg: Link to kegg annotations (AT4G28250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429631.1)
• Pfam: Lytic transglycolase (PF03330.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;