Id Trinity | TRINITY_DN35619_c0_g2_i1 |
---|---|
Name Transcript | Ll_transcript_358572 |
Sequence | TAGGGATTGCAACCGTGGCTCCAATGTCGGTGGTGGTCGTGGCGGCGGCGGTGATGGATGTTATCAGTGCGGCGAATTTGGCCACATGGCTAGGGATTGC AACCGTGGCTCCACTGTCGGTGGTGGTCGTGGCGCCGGTGGAGCCGGATGCTATCAGTGCGGTGAATTTGGCCACCTCGCTAGGGATTGTAACCGTGGTT CCAATGCTGGTGTTTGTTATAATTGCGGTGGAATAGGGCACATGGCTAGGGATTGCACAAGTGGAAGAAACAGTGGTGGCGGTGGTGGTGCTGGTTGTTA CAACTGTGGTGGATTTGGACACATGGCTAGGGATTGCTTGAAGGGGAGCAATGGTGGCGGTGGTGGTGGGGGATCGTGCTACAATTGTGGCGAGTTTGGG CACATGTCGAGGGACTGCAACATTGGAAGTGGCAATCGTGATCGTGCTGGTGGTAATGGCGGAGGTTGCTATAGATGCGGTGAAGTTGGTCACTTGGCTA GGGATTGCAACAAAGAAGGTGGAAGCTATGGTGGTGGCAACAGTGGAAGCTATGGTGGTGGCAACGGTGGAAACCGCACCTGCTTTAATTGTGGTAAGCC TGGCCACTTTGCTAGGGAATGCGTTGAAGCTTCTGGATAGAAGATATTACCAAATTTGCAAAGGAAATTTACTTTTGCAACTTTTTACAGTATTGCTTTT TAGTTTACTATGGTAAAGTTTATGAAATTTATTTGGTTAACAAACAGGATGTTATGGCAAAGAACCAAAGACTGTGATTATGGCTCTGTTACTGTTTCAC ATATGGGTTATATGCTACAGGACCGAAGTTTCTATTTTCATGATACATTCTTGATTGACAAATATGCATTATTATGCCTTGTTTTTGAAATATAACTTTA TTGTTCTAGAGCTGTGAAAAACTTCATACCATTTGTGTTTTGGGCTGTTAGGTTATTGTTAATGGTCATGGTTTGAAGTTTTATGCTTGCAAGATTGTGA ATTATACCTTTTTATGGATATGATAGGAAAGGATAAAATTTGTCTATTCTACCTTTGGTTTACTCACTCTGCCTGTGTATTTCCAAAGATGTATTGGGTT TGGTATTGGACTGAATTGTTGGCTGTTATTTTCTTTGATTTGGATTGAAACCTGTAACTATGGGAACAAAGATTGTCTAAAGTGCTGAGAAGCTGAGGAA GGCACTAAAAGAATAAAGAAGAGGAGTAATGATAGTATTTTGAACTCTGATAAATTCCCTCCTGCATTGCATTTCAGAGGCTGAGGAGCCTTGAAAACAT GAGAATG BLAST |
Tissue | pods |
Gene name | LI_gene_127349; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_358572
Blastp | DNA-binding protein HEXBP from Leishmania with 40.52% of identity |
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Blastx | Cold shock protein 1 from Arabidopsis with 35.14% of identity |
Eggnog | zinc finger(COG5082) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424476.1) |
Pfam | Zinc knuckle (PF00098.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |