Id Trinity | TRINITY_DN35692_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_358621 |
Sequence | ATTCCATCAACATAACCATAAGACAAAACATCATTTACTTACAAATACACACCTAAGTATTCAGATAACATTGAACCACGATGTCAGGTTTAACTAGTGC TGCTTCGGTCCAACAAAGTGCAACTTCGGCTCAGCAGAAAACTCAACTACCGAACCCATTGCTTCTTTCTGACTCTGAGATCCTGAACAAAGCTTATCTG ACCCATCTCAAAGATGATCAGGAGTGTGATATCAAGACCCTTTATGACCTTGTCTCCATCGTTCTTTCTGCCTCAACTCTTGGAACTGCTATAGTTAACA CTCAGTCACAGATCACTACTGTAACAAGTTTCAAACCGGAGTTCCATGAACTGAAGCTGATTTCTTCTCAGATGATAACCACACGTGGAACAGCACATTG TACACACCAGACAACACTTTGGATTCTTCAAGGCCTTAGAGGTTTCTCCTGGGATGCAAAAACACTTATAACTCTAGCTGCTTTCTCTCTGGAATATGGA GAATTCTTGCACCTTCTTAGGCTTCCAGCATCTGATATGCTTGGAAATTCATTGAAACAACTGAACCAAATTCAAACCAGAAAAGTTCCTTCTGATATTG TTGAACTGTTAGCATTTATAGTGCAACAAGTTATTCCGACCATTAGAAAGTGGGCATTGTGGTATGGTAATGATTATGACACAGAAAAAGTTTATTCGTT GTTACTTGCCACTCAAGAAATCCCACTTGTTGTGTATTGGACAATTGCTGCTACTGTTGCTTGTTCTGGCAAATTCGTTGGTAATACATTGGAATATGAA TTGTCAGAATTTCAACTTAAGCTTTCTAACTTTGTTGGCAAATTGAAATATCATCTAGAATCATGCCAAAACCAAATAGGGAAAGTGGACGACAATGAGA AACGTATTAAGGATTCTGAAAGAGTTAAAGATGTTGTTGGTTTCTTGAAGCTTCTCATCCATGGCAAAGGATCTCAAACACCCCGAATATGTGAAGGCAA CACCCTAGTTAAAACGGGTGTTGAAATCTTCAAGCAGAAATATGTGTTGCTGTTCATTTCGAACCTAGAAAGTGTTCGAGATGAGATTTATCTGTTAAAT TCTATATATAAGAGACTACAAGAAAATCCAAAAGTTGTAAAAGGTTTCAACAAAGAAGATTTCAAGATTCTGTGGGTCCCAGTTGTGGATGATTGGAATT ATGACAATAGAGAAAACAAATTCATGGAATTAAGGAAAGAAATAAAATGGTATGTGTTGGACTATTTTTCTGAGTTACCAGGCATTGGACTAATACAGGA GAAATTGAAATATGATATTGAGAAGAAGGATCCTGTTATCTCATTGATAAACCCTCAAGGTGACATAATGAATGAGAATGCAAAGCCCATTATTTTTCAA TGGGGCATTGAAGCTTTTCCTTTTAGGAAAGAGGATGCTGAAGATCTTATTAAGAAATGGTTGTGGCTTTGGAAGTTGATCGAGAAAGCAGATCCTAATA TTATCACAGAGGATATCACAACAAGGGATCATTACTTCTTCATCTATGGAGGTAACGACATTAAATGGATCCAAAACTTCTCCACTGCAATGGAAAAAAT TAAAAAACATGAATACATCAATGATTTTGATCTTACAATCCATCGCCATCAATTGGGAAAGGATAACCCAGACAAGGTTCCTTATTTCTGGATTGGCATA GATGGCAAAAAACCCAAAAAACAGTGCCAAGGTGCCATAGACTGTGAAATTCAAAAGGCCTTAGAGAGCTTGCAATGCCTGAAAAAAGATCCATTTGGAT GGGTTCTCCTTAGTAAAGGGCATAACATAAAGCTTCTTGGTCATGGAGAACCTATGCTACAAACTGTGGTGGATTTTAATAAATGGAAAGAGAATGTGGT TGAGAAAGAAAGCTTTGATGTTGCACTCATAGAATACTATAATAGTGTTGTTAAAGCTATTTCTGCTCGTTGTGATAACTATATTTCTGATGTGGTTGCA ACCATAGCATGCCCTAATCCCACGTGTGGACGTGTGATGGAAGTGACTTCTGTTAATTACAGTTGTTGCCATCGTGATAATCCAAACAGTTGCAGCATCA CACTCATCTGAGTTCTGTGGCCAATGTTTGCTTTCTTATTAGAACATGCAATTTCAGTTAAACGTTTTGTTTTGTTTGATTTTATGTGTGTGTCAAGAGA AATGTTATGTTTCGCCCTTTAATGGGTTAGAAACTAAATAATGGATTTAGTTTGTTTGTATGTTACTAAGTTTCTTGATTGAATAACATTATAGTTATGT GTGTGCAATTCATAAATCTTTTGTTTTCTTTAAACATGAAATTTCAGTTCAACCTAAA BLAST |
Tissue | pods |
Gene name | LI_gene_127425; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_358621
Blastp | Protein SIEVE ELEMENT OCCLUSION B from Arabidopsis with 26.03% of identity |
---|---|
Blastx | Protein SIEVE ELEMENT OCCLUSION B from Arabidopsis with 26.31% of identity |
Eggnog | Mediator complex subunit 28(ENOG4111ADI) |
Kegg | Link to kegg annotations (AT3G01680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459671.1) |
Pfam | Sieve element occlusion N-terminus (PF14576.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |