Ll_transcript_444658

• Id Trinity: TRINITY_DN35745_c0_g1_i1
• Name Transcript: Ll_transcript_444658
• Sequence: AACAACCCTAGTTTTGTCCTTCTATTATGGATTTCGCCATTGACATGTTCAAGCAAACCAAAAAAACCAAAGGGCGCAAGAAGATTGAGATAAAGAAGCT TGACAAGAACTCCAACAAGCAAGTGACATTCTCAAAACGACGTGCAGGGTTGTTCAAGAAAGGAAGTGAACTCTGCGTTTTATGCAATGTTGATGCAACT ATCATTGTGTTTTCTCCTGCAGACAAGTTATTTTGTTTTGGGCAACCTGATGTGGAAACCCTAATCACACGGTATCTTAGAAGAACAACAGAGATGGATC ATAAAATCCCAAGAAGTGAAACAGTGTCATATGAAGAGCATAATAAGGAATATGATGAAGCAATGAAAAAGTTGGAGATGGAGAAGAAAGAGTTGGCGAA TTCTGGTAAGGATTGGAAAAAAGGGAATTGGTGGAATGAGCCAATACATGAGATGAGTGCTGAAGAGTTGGAACAGTTTATGGTGGCAGTTTATGAGTTG AGAAGGAAGCTAGATGAAAGGAGAGGTGAGATAATGATGTAGAATGTTTGGAATTTTATCAATAAATTATTATTATTATTATGGGCAAAAAGTTTAGCTC ATGTTATTTTTCCCATAAATATATTTTAAGTAGTGTGTGTTATTATTAATATTCCC
• Tissue: pods
• Gene name: LI_gene_127468;
• Additional information: details;

Expression of Ll_transcript_444658

FPKM

• PAB: 0.5
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.1
• PS3: 0.2
• PW1: 0.9
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_444658

• Blastp: Agamous-like MADS-box protein AGL62 from Arabidopsis with 41.18% of identity
• Blastx: Agamous-like MADS-box protein AGL61 from Arabidopsis with 39.86% of identity
• Eggnog: Transcription factor(COG5068)
• Kegg: Link to kegg annotations (AT5G60440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436118.1)
• Pfam: SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;