| Id Trinity | TRINITY_DN35877_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_408075 |
| Sequence | ATTACATTGATTGAATGATAGTTGTTGGGAATATTTGTTCCTTAGTGACATAGTAGGAGTATATCATGATTATACATAAAAAAAATAGTTTCAGTTCTTT TTCCCCTCATCCACATATAGTTTAGATTACAATAGAGAATCTAAAAATAAAAATACAAAACGATGCGTTTCGTAAGGCATGAATTTGTTGAATTTTGATC CCTAATCCCTAACCTTCGTTTCCCTCCAAAATTCCATTCTTTCACACTCTTCAAAGGAGGGTTCTGAATTCTCATCAATCGCTGAAGCGAAAAAGCTTCA CACCCATGGCTTCAACTTCACGTGGTGGTAGTGGCGGTGCTGCTGGACGAATAAAAAACTTAGCTTCCTCTTTCAGTTCCGATTATCAACCTCTCATTAC TGATATTCGAAAGACTATGAGTTTTATGAAGGATATTGCGGTTGAATTGGAGAAAGATGGCCTCTCTGATAAGGTCAAGGAGTTGGAAGATGCGGTTATT GAGTTAGCGGGCCTATCTGGACTCAGCGTGCATTTTTCGTCTGCTGTTCAAGCTTTTGCAAACAGATACCAGCCCGGAGAAGAGTTGACTGATTTTCATA AGGTTTTTGAGGACGAAGTTTCACAGTTTAAGGATAATCCAACTACAGATCCTAAAAAACACCATTTTGTACGCCAATTTAAGGAAGCTGTATGGAAAGT CCATCACGAGGGACAACCAATGCCAGGTGAAGAACAGGAGGACATTGTAATGACCAGCACCCAATCTAGTATTTTGAATATGACTTGTCCCCTGACTGGA AAGCCTGTTACCGAGCTTGAAGATCCAGTTCGCAGTATGGAATGTAAGCACATTTATGAAAAGGCAGTAATAATGACATATTTAAGGTCAAAGCAGCAGT CTCGATGCCCAGTGTCAGGTTGCCCAAAGATATTGGTGGCGGATAAGGTGGTGAATGATCCTTTGTTACTGATTGAGATCGATGAATTGCGCAAAATGAC TAAAGAAACTAATATAGTAGAAGATTTTACCATGATTGATGAAGATGATTGATTGATAAAATCAACTGCAAATAGGATTTTGGCTGTAAATTGTGGTAGT TTTGAACATCCAAAGGATGTAGTTGTAGTTCATCACCATTCACTAGAAATGAAGTGTTGAAAGTGTTCACAGATTGCAAAGTTGTAACCCTTGCATGCAG TAGTGCAGTTCCTATGATGGTTTAATTTTATAGTCTAGTGTTTACATGCTTTGTTATCTTTTGTGTTCTATTATACTTCATATTTAAGAATTATAAAAGA G BLAST |
| Tissue | pods |
| Gene name | LI_gene_127571; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_408075
| Blastp | E3 SUMO-protein ligase MMS21 from Arabidopsis with 52.59% of identity |
|---|---|
| Blastx | E3 SUMO-protein ligase MMS21 from Arabidopsis with 52.12% of identity |
| Eggnog | non-SMC element 2, MMS21 homolog (S. cerevisiae)(COG5627) |
| Kegg | Link to kegg annotations (AT3G15150) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443919.1) |
| Pfam | Zinc-finger of the MIZ type in Nse subunit (PF11789.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |