Id Trinity | TRINITY_DN35919_c0_g1_i1 |
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Name Transcript | Ll_transcript_324999 |
Sequence | TGAAGCCAAACATTTGTGTATCTCTTGTATCTCAATCTAAAAATAGAGCATGTCCAAAATGAGTTTCCTCAAGTTTCAGTATAACTTCTCAGGGAAACCC TCTTCTCCAAACAAAAATCTTTCACAGAAGAACAACTTCAAATCAAGCTCAACATCAAGTGCAGGTAAAGAATCAAGCTTTCAACCAAAAATTGAAGAAA TGAAATGGGTTTTTGAGAAATTCGACACCAACAAAGACAGCAAAATTTCCCTTGAAGAGTACAAGGCAGCTTCAAGGGCCTTGGACAGAAGCATTGGTGA GACTGAAGCAGCCAAGGCATTTAAATTTATGGATACTGATGGCGATGGATTCATTAACTTCAAGGAGTTCATGGAAATGTTCAATGGAGAAAACAAAGAT GGTAAGGTAAAAGAAACTGAGATAAAGAATGCTTTTAAAGTATTTGATTTGAATGGTGATGGGAAAATTAGTGCTGAGGAATTGTCTCATGTTCTCAAAA GACTTGGAGAGAGTTGCAGCATTGGCGCATGTAAAAAGATGGTGAAGGGAGTGGATGTTAATGGAGATGGTTTTATAGATTTGAATGAGTTTATGAGGAT GATGATGAGTGGAAAGAAACTTGGCTAAGTGATCATATTTTATATTTTTGCAAAGGCTTTATCTGTGTGTTAGAAACCAAGGCAAGAGGAGGAGAATCTT GTTCAGTGGTTTGTGTCTTCCTCTAAATATTTAGTTTTTTTGGGTGCCTAAATACATGTTCTAGAGGATCATCCTTTGTTTGTGTGGTTAAATAGTTCTT GTTATTGGGTGTTGTTGAATAGATAGTGTGGTTAAATGTATGGAGATTAATATTCCTTTGTTAGTTTGATTCTGTACATAGTTTTGTTACTTTGGCTTAA GAATGACAATGGGGTGGGGCGGGTCAGGTTTGCGCTTACCCAACCCTGAACCCAAAATTCAAA BLAST |
Tissue | pods |
Gene name | LI_gene_127611; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_324999
Blastp | Calmodulin-like protein 1 from Arabidopsis with 44.44% of identity |
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Blastx | Calmodulin-like protein 1 from Arabidopsis with 48.25% of identity |
Eggnog | Calcium-binding protein(COG5126) |
Kegg | Link to kegg annotations (AT2G15680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423154.1) |
Pfam | Secreted protein acidic and rich in cysteine Ca binding region (PF10591.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |