Ll_transcript_324924

• Id Trinity: TRINITY_DN35966_c0_g1_i1
• Name Transcript: Ll_transcript_324924
• Sequence: ACCGACCTTCTCATGGCCACTCCGAAATACGTTGCCCACATAGATATGTCATATGACCAATTATATATCCCACAACCAGAATTAATTTCAAGTTAAGAGT ACCTCAGTGAAAACACGCCTAAATTCATTTTTGGATTTAAAAAAATTTAAAACGAGAGAAAGAAAAAAGAAATGAGAGCTTCTCTGTGTGTTAAACCCTA ACTCCTAACCCTAACTCATCTCACACGCTCACAGTCACATTCAACCATGCCTCTCCTCTCAAATTCCAAGCTTCTCCGTTGGAAACCTTCTCTTCCTCCT TTCATCCCCAAGCCCTCCTTCCCCTTCTCCACCTCCAATGCCCAGCCTCTCTCCGAACCCGAACCCGAACCACTCCCTCCCCAAACCCAACCCCAACCCA CGCAACGCACCGTTTCAACCAGACCTCAAAATCAGCAAGAGAACCCCGAGTCTATTATCTGCAGGATGATGGCGAACCGGGCCTGGACCACCCGTCTTCA AAACTCGATCCGGTCCATCGTCCCCCGGTTCGATCCATCCCTTGTCTTCAACGTCCTCGACGGCGCCAAAAGCCCTGATCACGCTCTTCAGTTCTACCGC TGGGTCGAACGGGCCGGGCTTTTCACCCACGATAGGGACACCACTCTCAAAATGATCCAAATCCTCGGTAGTTACTCCAAACTTAACCACGCCAGATGCA TTCTCCTCGAAGATGCACCGAAGAGAGGCGCTGTCGTTGATGAAGACATGTTTGTTGTCTTGATTGATAGCTATGGCAGAAGTGGGATTGTTCAGGAGAC CGTTAAGATTTTCCAGAAGATGAAGGAGTTGGGGGTTGAGAGGACCGTGAAGTCTTATGACACATTCTTCAAGGCGATTTTGAAGAGGGGGAGGTACATG ATGGCGAAAAGGTATTATAATTTGATGCTTAGGGAAGGGGTAGAGCCGACTCGGAATACATATAATATACTGCTTTGGGGTATGTTTTTGTCAATGAAAT TGGATACTGCTGTTAGATTGTACGGTGATATGAAAAATAGGGGAATTGTACCTGATGTAGTGACTTACAATACTTTGATTAATGGTTATCATCGGTTCAA GAAGGTGGAGGAAGCCGAAAAGTTGTTTGTAGAGATGAAGGGGAACGATATACTGCCAGATGTGATTAGTTATAATACTATGTTAAAAGGGTATTTTGCA GTAGGGCAGGTTGATGATGCGCTTAAGCTTTATGAGGAGTTGAAAGGTGTTGGCATCAAATCAAATGCAATTACTTTTACAACACTGTTGCCAGGGCTTT GCGATGCAGGGAAAATTGCTGAAGCTCAGAATGTTTTGGGGGAGATGGTGGAGAAATATATTGCTCCTAAGGATAATACTATTTTCATGAAACTGATTAC TTGCCAGTGTAATGCTGGTGACTTGGATGCAGCTGCAGGTGTTCTGAAAGCGATGATACGTTTGAGAATTCCCACAGAAGCTGGTCATTATGGCATTCTA ATTGAGAATTTCTGCAAGGCTGATATATATGACAAGGCAGTCAAATTGTTAGACAAGTTGATTGAGAAGAACATCATCTTGAGGCCAAAGAGTACTTTTG AAATTGAAGCTAGTGCTTATAACCCGATGATTCAGTATCTGTGTGATAATGGGCAGACAGTTAAAGCAGAAACATTTCTTCGCCAATTGATGAAAAAGGG TGTATTGGATTCAGTTGCTTTTAATAATTTGATCCGTGGGCACTCGAAAGAAGGAAACCCTGATTCTGCTCTTGAAATTCTAACAATCATGGGTAGGAGA GAGGTTCCTAGAGATGCAGATTCCTACAAGTTGCTTATCGAATGTTACTTGAGGAAAGGTGAACCAGCTGATGCTAAAACAGCTTTGGATGGCATGCTTG AAAATGGGCATATTCCCGAGTCATCCCTTTATAGGTCAGTTATGGAAAGTTTGTTTGAAGACGGAAGGGTCCAGACCTCAAGCAGAGTAATGAAGAGTAT GGTGGAGAAGGGGGTGAAGGAGCATATGGACTTGGTTTCTAAGATATTGGAGGCACTTCTCATTAGAGGTCATGTTGAAGAAGCTATCGGCCGAATTGAT TTACTTATGCATAGTGGTTGTGAGCCTGATATAGACCGACTTTTATCTGTTCTTTGTGAGAAGAAAAAGACAATTGCTGCTCTCAAACTGCTAGATTTTG TTCTTGAGAGAGACCATGTCTTAGATGTTTCAATGTATGATAAAGTTTTAGATGCTCTCGTAGCAGCAGGGAAGACCCTCAATGCATATTCCATGGTATG TAAAATTGTGGAGAAAAGAGGTGCAACCGATTGGAGTAGTCGTTATGAACTGATCCAGAGCCTTAATCAGGAAGGGAACACAAAGCAAGCTGATGTTTTG TCAAGAATGATGAAGGGAAAAACACAAAGTCCCCCAAAGAGAGAAGGAAAGAAGCAAGCTTCTGCAGCTATATAATTTGTTCTCTCTTCATTTTCTTTTT CCTTTTTTAGAGGTAAGAACTGAGAAGTGTTGCAGGGTTTTATGTTGATTATAATAAGTTTATTAGGAAGAGAAATTATGAATTGCTCTTCATTTCAAAT CCAACATTGATATTCCTTTTTATTCACTCTGATGTTCTTCATTATGGATCAGAGATTTGTTATATGGCACACATCACAAGATTTTAATGATTTTATTGTT ATATTGCCACCAATGTGCTTTTACCAGGTTCTTCAGTTTTGTTTTGCATCTGTAACTCAATTCCTTGGAATGATGTAACTGTGAAAGAACTAGACTTGTG TTTTCAATCAGATTTTTCTGTATTCTACATTCCTACATATTTATCACAATACTGAATGTGGATTTGGTGTTTTGATCTGTGCCGTGCTATATTGTGGTAG ATTGAGATCCTTTTTCATTTTGAAGACAAAAGGTAAGAGCAATCCTAGATATTTTAGTTTCTCCCCTTTCGGTTTAAATCTTTGTTTCTTTTGAGCAAAA ACATCC
• Tissue: pods
• Gene name: LI_gene_127660;
• Additional information: details;

Expression of Ll_transcript_324924

FPKM

• PAB: 1.7
• PNAB: 14
• PS1: 12
• PS2: 7.4
• PS3: 10.9
• PW1: 9.8
• PW2: 7.6
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_324924

• Blastp: Pentatricopeptide repeat-containing protein At2g37230 from Arabidopsis with 63.7% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g37230 from Arabidopsis with 68.13% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G37230)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464106.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;