Ll_transcript_324935

• Id Trinity: TRINITY_DN35980_c0_g1_i1
• Name Transcript: Ll_transcript_324935
• Sequence: GAAAATAATTAAATTTAAATCATGCAGTCGTTTAATGATACCACGAGGGTCCTTTCTCCTTATCTCACAGTCACAGACCCTATCCTCCAACATATACATG AAAACATAACACACTAAAACCTGTGTGTTGTGTTGTGTTCAATGGCGTTGTCGTTCTCTTCCATTATCCACCATCCCCACACCGCTCTCCGCCTTAAACT TCACCGTCCTTCTTCTCCTCATTTCAGAAACTTTGCCTTCAATTTTCACTACAATCACAAGCATAAACCCATTGCTTCTTTTCCACATTTACACCCCAAT CCACCCTTACGCCCTTTCACTTTCAACCATGCCACCAATTTCTCTCATCTCTCTAACAAATCTGATGCTCCTACTCTCCGTCACTTCATTGCCCAGTCTA CTATTACTGCTTCTGAATCTCAACCCCACCTTGTACCAGAGGCCGAAGTTCCTTCAAAAGGTCGTATATTTCATGAGACTTATGGATGTCAAATGAACGT TAATGATATGGAGATTGTCCTTTCTGTAATGAAAAATGCTGGCTACAGCGAAGTTGTGAGTGCCCCTGAGAATGCAGAAATAATATTCATCAACACTTGT GCCATCAGAGAAAATGCAGAACAGAAAGTGTGGCAAAGGCTCAATTACTTTTGGTTTCTTAAGAGGGAATGGAAGAGCAATGCTGCCACTGGAAGGTCAC AGTCCCTGCGCCCTCCAAAAGTAGTTGTTTTGGGATGTATGGCTGAGAGGTTAAAGGAAAAGATACTTGATTCAGACAAAATGGTTGATGTGGTCTGTGG GCCTGATGCTTATAGGGATTTGCCTCGATTACTGGAAGAGGTCGACTATGGCCAGAAAGGAATCAATACTCTTCTTTCTCTTGAGGAGACTTACGCTGAT ATTAATCCGGTTCGGATCTCCAAGAATTCGATTTCTGCTTTTGTCTCAGTGATGAGGGGTTGCAACAATATGTGCTCTTTTTGTATTGTGCCTTTCACTA GAGGTAGAGAGCGCTCACGTCCCGTGGAATCCATTGTGAGAGAGGTGGCAGAGCTTTGGAAAGAGGGTGTGAAAGAAGTAACACTTCTTGGCCAGAATGT GAACAGCTACAATGATACATCTGGGGTTGAGAAAGAGGTTGAGCCTGGCTCCAATTGGAAACTTAGTGAAGGATTTTCCAGCAGATCTAAGGTCAAGAAT ATGGGCTTAAGGTTTTCTGATCTATTGGATCGGCTCTCCTCAGAATTTCCTGAGATGCGATTCAGATTCACATCTCCACACCCTAAAGATTTCCCAGATG AATTGCTTTATCTTATGCGAGAAAGACATAACGTATGCAATTTGATACATTTACCTGCACAATCAGGAAGTAGTGCGTTGCTTGAGAGAATGAGACGAGG ATATACTCGAGAAGCTTACTTGGATCTTGTGCAAAAAATTAGGAGTACTGTTCCAGATGTGGCCTTAAGTAGTGATTTCATTTGCGGTTTTTGTGGAGAA ACAGAGGAAGACCATGCAGACACATTGAGTCTCGTAAAGGCTGTTGGCTATGATATGGCATACATGTTTGCTTACAGCATGAGGGAGAAAACTCATGCCC ACCGAAATTATGTTGACGATGTTCCTGAGGAAATAAAGCAGAGGAGGTTAACTGAACTTATTGAGACTTTCCGCGACAGCACAGGCAAGTGTTACGACTC TCAGATCGGAACTATACAGCTAGTATTAGTTGAAGGACCCAACAGAAGAGCTCCAGATACCGAGCTTATGGGCAAGAGTGACAAGGGCCACCGAGTTTTA TTTGTAAACCAGCCAATCCCAGACAGGGAAGATGTTAATACAAAGCGAAATCCTGTGGTTGGTGATTATGTCGAAGTCCGGATATCAAGATCTACAAGAG CATCACTCTTTGGTGAAGCACTTGGTATAACAAAGCTGAGTTCATTTTACAGTAATCTGGATAAAGAAGCTGTTGCAGCATAATCAGTTTGTCATGGCAA TTTTTGGATATAGACATCTCTTTCCCTTGTTTAGCTCACTACACAACATAAAGCTAGCCTACCACATGTATCATACGCTATTCTTCTCTATACATTAAAA GGGTTGAGTGTGCATTTAATTAAATTTACATTATGGAGAACACTGAGAATCCTTGGCAAATCTGCAATGCAACTTCAAATAGCCCAAGGACAATTGTTGT GCTTTTTTATCTGTTAATTTTTTGACAATTGAGATTTGATAAAGGACAAATTTTAGGTGATTTGGGG
• Tissue: pods
• Gene name: LI_gene_127674;
• Additional information: details;

Expression of Ll_transcript_324935

FPKM

• PAB: 1.8
• PNAB: 12.6
• PS1: 8.2
• PS2: 8.3
• PS3: 7.9
• PW1: 9.4
• PW2: 9.9
• PW3: 7.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_324935

• Blastp: CDK5RAP1-like protein from Arabidopsis with 75.13% of identity
• Blastx: CDK5RAP1-like protein from Arabidopsis with 75.13% of identity
• Eggnog: Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (By similarity)(COG0621)
• Kegg: Link to kegg annotations (AT4G36390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421840.1)
• Pfam: Uncharacterized protein family UPF0004 (PF00919.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;