Ll_transcript_324941

• Id Trinity: TRINITY_DN35999_c0_g1_i2
• Name Transcript: Ll_transcript_324941
• Sequence: GGCGAAAGTAGATATATGCATAGAGAGAGAGAGAGAGGATTGATTAAAGTGTGGAAGAAGATGAGTAGAATTGGAATATTGAGAAATCGATTGTAATTGG AATTGTTGAGTGGAAATGGATTTGGTGGAATTGGAGGAAGTAGAAGGGCTACGTTGGTCATGGAACTCATGGCCAGTTACGCGAAAATCAGAAGAAAGTT TGATAATTCCATTAAGCATCATGTGCAGTCCTTTAAGCAAGAGGAATGACCTAATCCCATTCCTTTCGTACGATCCCCTGTTATGCTCCCGATGCGGTGC CGTTTTGAACCCTTACGCTCGCCTCGACTACCAGTCTCGCATCTGGCACTGTCCTTTCTGTTTCAACCGCAACCCTTTCCCACGCTCTATTCATCACACC AGCCTCCCCGCTGAGTTATTCCCTACCTATAGTTCTGTCCAATATCTCAATCTCCATACTCCTACTCCTACTTCTACTTCTTCTCCTGCCTTCGTCTTTC TTGTTGATATCTCTTCCCCTCAGGATCACATTCTTTCACTTAAGAATGATTTGCTATTTGTGTTGGATCAGCTGCCAGAGAATGTCTTGGTTGCTTTGCT TACTTTTGATTCTAATGTTTATATCCATGATCTTGCTTATTCCCAATGTTCTAGGATTCTTATGCTTCATGGTCACCGCCAACTTTCCTCTCTTCAGGTA TTCTATCTCTATCCCTATCCCTATTCAATCATTTATATGCTTTCTATCCACCTCTAATCATATTCTATTCTAATAATATTCTATTCTATTATTTGCTGTT AGACCCGCCAGTTTCTCAACATTACCCACACACATCACCACCACCAGCACCAGCAGCAGGGTTTTCTGTTGCCAATCTCAGAATGTGAATTCAATATCAC TTCTGCTATTGAAGACATTCATTCTACGGCCGACTCTCCATCACCCACTCGCCCACTCAGGTCTACCGGGGCTGCAATATCAGCTGCTCTTGGACTTCTA GACTCTTGCGGAATCAATACCGGTGCCAGAATCATGCTCTTCACATCTGGACCTTGTACTGTAGGACCAGGAGCTGTTGTAGGATCTCATTTTTCCCATA CCATGAGAACCCACCAAGACATTATCAATGGCAACGCCCACGCACGACACCATCACAAATCCTGTGCTTTCTACAAGCAACTCTCCAACCGCCTATCCGA TGCCTCTGTTGTTCTTGATCTCTTTGCTTGTTCCCTTGACCAAGTCGGAGCAGCCGAGCTTCGAGACCCCGTTGAGCGTTCTGGTGGACTTATGATTCTT GCCGACTCTTTTGAGTCAGATCAGTTCAGGAAATGCCTCAGGCACTTATTTAAACGTGATGATGATGGCTACTTGAAGATGAATTTTGATGCAACTATTG AAGTAGTGACCACCAAAGATGTCAAAATATGCGGAGCTCTTGGTCCTTGTGTGTCTCTTAGAAAAAAGAATAGTTTAGTGAGTCAGACTGAGGTTGGAGA AGGTGGTACCTACATCTGGAAGTTGAATACACTGACTGACAAAACTTGCATCGCTTTTTTCTTCCAAGTGAATGATGAACATAAAATTCAACCCGGATCT GCATTTTTAATTCAGTTTATAACGCGATACAGACAAGGGAACATGATGGGACTGAGAAAAAGAGTGACAACCGCTGCAAGACGATGGGTCGGGAACCATT CCACCGACATTGCTGCTGGGTTTGATCAAGAAGCTGCAGCTTCTGTTATGGCAAGGCTTGCCATTCTCCGAGCTGAAACATGCTATGCCCGTGATGTTAT TAGATGGCTGGATGACACACTTATCCGCTTTGCTTCCAAGTTTGGGGACTATGTGCCGGAAGACCCTTCTACCTTCCGCCTATCCACCAACTTTTCCCTT TATCCTCAGTTCATGTTCCACTTAAGACGATCTCAATTCATTGATGTCTGTAACACCACTCCAGATGAAACTGCATTTTTCCGGCTTATGCTGAACCGTG AAGGAGTCGTCGGCTCTCTGATCATGATTCAGCCTACGCTTTTCCAGTATTCTTTTGATGGGCCGCCTGTTCCAGTACTTCTAGATATTCGTTCCATTTC TCCAGATTTTATCCTGCTCTTCGATTCTTACTTCCATGTGGTGATTCATTATGGGTCCAAGATCGCTCAGTGGAGAAAGCTTGGTTACGATAAGGATCCA AATCATGAGAACTTTAGAAAACTGTTGGAAGCCCCAGAACTGGATGCAGAGCAATTGGTGGCTGATCGGATTCCGGTGCCGAAGATTATAATATGTGACC AACATAGTAGTCAGGCAAGGTTTCTTCTTGCAAAGTTGAACCCATCTGTTACTCAAAATTCAACATACACAGAAGGTTCGGATATTATCATTACCGATGA CTTGAGCTTGCAAGTTTTTTTAGATCACTTGCAGGTACTTGCAGTGCAAAGCTGAAAAGAAGAGCATTAATTGACCTCATTTCTCTTTATTATGGGATCA TTAAGAAAAAATCTGAGTAGCTTTCATTGAGGAGGTTCCATGTTTTCAGCAGAAAGTGTTTCATTTCATTGTTCACTTACTGAGCTGTAAATTATCCAAT TTACTATTTAGTATCATCAGAATATAGTTGTCTGGTACACTAATTTTGAAGATGTAGCATATGGTTTTACTATTACTCTGACCAGGAACTGGATTATCCC CTAGTTTGTTGCTGTACTGTAAAAAAACATCACTGGATGTTATCATATGATTGATTAAAGGGGTGCTGTATTTTAATTGCTTTTATGTTTTTCTTTTATA GTGGTAGATAACTCCTACTTTTCTCTTGGTTGAAAGGGTTCATAAAGGATTGAATGCTTTTATATGAACGATGCTATTCAACACATAATGGTTCATTTTG AAGCAGG
• Tissue: pods
• Gene name: LI_gene_127686;
• Additional information: details;

Expression of Ll_transcript_324941

FPKM

• PAB: 0.4
• PNAB: 0
• PS1: 0.2
• PS2: 0.1
• PS3: 0.4
• PW1: 0.1
• PW2: 0.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_324941

• Blastp: Protein transport protein SEC23 from Ustilago with 49.79% of identity
• Blastx: Protein transport protein SEC23 from Cryptococcus neoformans species complex with 41.91% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (UMAG_01624)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417587.1)
• Pfam: Sec23/Sec24 trunk domain (PF04811.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;