Ll_transcript_459435

Id TrinityTRINITY_DN36148_c0_g2_i1
Name TranscriptLl_transcript_459435
SequenceCTTACTTTTGTCCCTTGCTTATGAATTTTTTCCAGGATTTATCTCTCATCTCTTGGAATATTCATGGTTCTTTTAGCCGTTGTAAAAAACGCCATGTTAG TGATATTGTGAGCCTTCACCATCCGTCTCTTTTCTTATTATATGAGACGCATGGTCCCTTTATTAATGTTGATCATTTTTTGTCATCTTTGGGTTATAGT CTTATATATGTTCAGGAAGCTAGAGGTCATTATGGAGGAATTTGGGTCCTATCATATAAAGCTGACCTCCATTTTTCTCTTGTTGAAAGTTTTTCTCAAG TCATTACCTTCTAAATTACGAGAGGGAATTCAACTTGGTTTTGTTCAGCAATTTATGCTTCTTCTATCTTTGCTATCAGGAACACTCTTTGGGGTCATCT GTTTTCTCTTCGAAGGAGGATTAATGGTCCTTGGATGATTATAGGAGACTTGAATGAGGTCTTAAGCCCTTCCGAGGTGATGGGGGGTAATTTATGCAGG TCTCGTGCAAACTTACTTGCGAATGTTATAGCTCAATATGATTTTATGGATCTGGAAATGGTGGGTGGCCTTTTCACTTGGAGAGGAAATGTGCATCACA ATGGTCATGTTAGGAAGAGGCTGGATAGATGCATGGTCGATGTAGAGGGCGCCTTCTATTTCCTAATGCCCTTGTGGAACTCCTTCCTCCTCATAACTCT GATCACAATCTTCTCTTGCTTAGCTGCCAGAAAGCTCACAGTAGAAAAGTAAAAAGTTTTCATTTCCAGGCAGCTTGGGTTTCCCACCCTGACTATGGTA AGTTGGTTGAGAATACTTGGAATACTTCTAATGGTAATGTAGTGCACAAAATGGGAATAATGCAAGATAAATCTATTATTTTCAATAGAGAAATTTTTGG TAACATTTTTGCAAGGAAGAGGAAGCTTGAGGCCTGTTTTGTTGGTGTTAATAGACAACTTGATGTTCATCCTTAATCGGATTTGATAAGTCTTGAGAGA GAACTTCAACAACAATACAACCAAGTTCTAGCTCAAGAGGAGATTCTCTGGTATAAAAAATCTAGGGAGAATTGGGTCAAGTTTGGCAATAGGAATACTA AATTCTTTCACACTCAAACTATTATTCATAGAAGAAGAAACAAAATTTTTGGCCTAAATATAGATGGTGTTTCGTGCACTAATGATGAGTTGTTAAAAAC ATCCGCTTCTTCCTATTTTAAGCATCTTTTTCAGTCTAATGACACTTGTTATCCTCATAGCCTGATGCTAAGAGCCACTCCCATGATTGACAATGAATTA CATGACACTTTGTTGAAACCAATTTCAATGAAAGAAGTTAAAGAAGCTTTGTTCTCTATGCACTCATATAAGGCACCTGCCCCTGATGGTTTCCAACCAA TTTTTTACAAGACTTATTGGATTATTGTTGGATGTGATGTTCATGAAATGATTGCTACAACCTTTGCTAGTGGCAAAATAGATTCTGGCATTGTTGACAC TTTAATCATTCAAAATTCCGAAAGATGATAATCCACCTAGTCTGAAGGATTTTCGTCCAATAAGCCTCTGCAATGTCCTCTTGAAGCTGGTTTCTAAAGT TCTAGTAAGAAGGATAGGACCTTATTTGGATAGCTTTATTGGCCCTCTCCAAAGTACTTTGGTCCCTAACCGTGGCACTAGCGATAATGCAATCAATACT CAAGAAGTAGTTCATCACATGCACAAGAAGAAAGGTAAACTTGGCTATCTTCTCTTCCAAATTGATTTTCAGAAAGCCTATGATAGAGTTGATTGGAACT TTCTAAGGCTTACGTTACAAGAATTTGGCTTTCCAACTTCTATTATCTATTGTGTCACTACATCTTCCTTGGCTTTAAAATGGAATGGTGAAAAATTGGA AAATTTTGCTCCGAATAGAGGGATGAGACAAGGTGATCCAATGTCTCCGTACCTCTTTGTTATGTGTATGAAAAAACTTTCTATGCTTATTCAAGAGAAG GTTCAAGATGGAAAGTGGAAACCAGTTAGGATTTTGAGAGGCAGTCCTTCGATATCTCATCTTTTCTTTGCAGATGACAGCATTCTTTTTACTCAGGCTA CCTCAGCCCAAGCTAGACTGGTGAAGGAAGTGTTGGATGCCTTTTGTATGGCTTCCGGTCTTAAGGTAAATTTACAGAAAACTAGATTCATGGCCTCCAA GAATGTGTTTTGTTCAAAAATTAACATCTTTGTCTCTATAACTAGCTTCCACCATACTTCTAGCTTGGGCAAATACTTGGGCTTCCCTATGCTACATGGG AGGGTGAAGAAAAGTGACTTTAGTTTCATTACTGAAAAAATCAGTAGTAAATTAGCAAGTTGGAAAGTCAAGTTATTAAGCAGAGTCGGTCGTGTCACCC TTTCTAAATCCATTATTGCTATTATTCCTATTTATTATGTGCAGAATAATTGGCTACCTTATGGTATTTGTGACAATTTGGATGCTTGTGTTAGACAATT TATTTGGGGGGGCAATTCTAATCATTGGGTTAGGTAGAGAGTTATAAATCAATCTAAAGATAAAGGTGGG BLAST
Tissuepods
Gene nameLI_gene_127798; 
Additional informationdetails; 

Expression of Ll_transcript_459435

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_459435
BlastpLINE-1 retrotransposable element ORF2 protein from Homo with 28.52% of identity
BlastxLINE-1 retrotransposable element ORF2 protein from Mus with 28.9% of identity
EggnogNA(ENOG410Y9TZ)
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019457635.1)
PfamReverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;