Id Trinity | TRINITY_DN36278_c0_g1_i1 |
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Name Transcript | Ll_transcript_329154 |
Sequence | CCAAGAAACACGCACCATCCCTTATTAATATAGCATAGTAGCACACATGATGAAGATATGGACCATTGCTATTAATATAGTTTATCTAAACATTACTCCT TTTGCAATCATAAATCTATCCATCTCCAATTCCCAGCCACCTGTGTCGCTCCCTAAGCCTGAATAGAGTCCACAATATTGAATACATAGAAATCAGAATT GTGTGAGAGTATGGGACAACCAATGAAGAACATTACATCTTCATCATTCCGCCTTCGAAGCCCTAGTCTGAATTCACTACGTCTCAGGCGAATCTTCGAC ATGTTTGACAAGAATGGAGATTCCATGATAACCATTAAAGAAATAAGTCAGGCCTTGAACCTCTTAGGCCTTGATGCTGACCTCACTGAGCTAGAGGCTA TCACACGTTCCTTCATTAAGCCAGGTAATGAAGGCCTAACTTACGAGGATTTCGTAGCACTTCATGAGTCTTTAGGGGATACATACTTTGGAATTGGAGA CGTGGAGGAGAATGAGGAACAAGAAGAGTCAGACCTGCGTGAAGCGTTCAAAGTATTTGATGAAAATGGTGATGGTTATATATGTGCAAAGGAATTGCAA GCGGTGTTAGGAAAGCTTGGACTCAATGAAGGGAATGAGATTGATAGAGTTAATAAGATGATTGTATCTTTTGACACCAACCATGATGGTCGTGTTGATT TCAGTGAATTTAAGAACATGATGCGCAACACTCTCATAACCACCTCTTGATTTTCTTACATTCTGTCTTCTTCAAATCCTTATTTTGTACTAATATGTAC AATCGTTTCTTCCCACATAGTCTCTTTTTCTTTTGCTACCTTTTCTTATTATAATTAAGATCAGTGTAATCTTTGCTTTTAGTTTGTTTGTTTGTTTCTC CATTTACCTTTTTGTATGCATGCTGGATGCAGCTCTTTACTGCTTTTCTTAATTTGTACCACCAACCATGCTTCTTATATCCTTTCTTCTTATCATATTG TAAAGCTGGGAATGCATTTGAAGGAATTAAAAATATTTCTGCTCTCA BLAST |
Tissue | pods |
Gene name | LI_gene_127916; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_329154
Blastp | Calcium-binding protein CML42 from Arabidopsis with 61.58% of identity |
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Blastx | Calcium-binding protein CML42 from Arabidopsis with 58.49% of identity |
Eggnog | Calcium-binding protein(COG5126) |
Kegg | Link to kegg annotations (AT4G20780) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464989.1) |
Pfam | EF-hand domain (PF13405.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |