Ll_transcript_425654

• Id Trinity: TRINITY_DN36358_c0_g1_i1
• Name Transcript: Ll_transcript_425654
• Sequence: GGAATATGTTCTCTCGCAGAAATAAAAGAGGCATTTGTTTTGGAACCCCGCCGTCTCCACCTTCTTCTCCAACCACAAAGAGCTGACCACAACACAACAT TGGTTCACATCATAACACAACTCAGAGGTTGCTAAGGCTTCACAGATCAATGGCTTCTTCTTCTGTTTTATTCACTGACACTTCTCCTTCCTCTGCCGCT CGCCTCCTCCATCTCCGCCATCGTCACGCCGTCGTTCCCTTCGTACGGCCCCTCCGTGTGGGACCTACCCAATTCCCAACTCCCTTGCGCTTCTCTCTTC ACACTTCTCCCTCTCGTCCTCCTCTTGTCCCCCTTGCTTCCTTGACTACTGAGGCTTCTGCTAAGGTAATTGATGGAAAATCAGTGGCAAAGCAAATCAG AGTTGAGGTAACAGCTGAAGTCTCTAGGATGAAAGAAGCCATTGGTGTGACACCTGGCTTGGCTGTAATCCTTGTTGGGGATAGGAAGGACTCTGCTACT TATGTGCGTAACAAGAAGAAGGCTTGTGATTCTGTGGGAATTATTTCTTTGGAAGCTAATTTGCCTGAGGATTCTACTGAGCAAGAAGTGTTGAACTATA TTTCTAGCTTCAATGATGATCCTTCTGTTCACGGCATTCTGGTTCAGTTACCTTTACCTAAGCACATGAATGAGCAAAACATCTTGAATGCTGTTAGAAT TGAGAAGGATGTAGACGGTTTTCACCCATTAAACATTGGTCGCCTTGCCATGCGTGGAAGGGAACCCCTTTTTGTTCCATGTACACCAAAGGGATGCATA GAGCTACTGCACAGATATGGTGTTCCTATTAAAGGAAAGAGAGCTGTTGTGATTGGTCGGAGCAATATTGTAGGAATGCCAGCTGCACTGCTGCTGCAGA GGGAAGATGCTACTGTCAGTATTGTCCATTCCAGAACCAATAACCCCGAGGAGATCACAAGGCAGGCAGATATTATCATCTCTGCCGTCGGGCAACCAAA TATGATTAGGGGAAACTGGATAAAACCTGGTGCAGTCATAATTGATGTGGGAATCAACCCCGTAGAGGATTCAAATGATCCTCGAGGTTATAGATTGGTG GGAGATGTTTGTTATGAAGAAGCGAGCAAAGTTGCCTCAGCCGTAACGCCAGTTCCAGGAGGAGTTGGTCCAATGACAATAGCTATGCTTCTCCAAAATA CACTCATTTCTGCAAAGAGGATCCACAATTTTGAATAACTTATATGGTCAATTGCAACCTAATGAAAGCATGTGTATCATTTTGACCTATCTATTTTTGT TTTTGGACTATTCTAGAAAGAATAAAAGGAAGTTTCTTCCCCTCCTGAACATCCCAGGTCACTGAATTTGCATCATTATATGATGCACAAATTTTCTAGC ACATTGATATTTATGTTTTAGGAAGAAAAACTCAGGGAGATCATGCAGCAATTAATTCATTAATATTAGGCATAATTAAGAGTATGAAATTAAATGATTG CTAGAGGTAGTATTGCAGTAATGTAAATTAAAGTCTGTTGCAACCGAAACTTGCTGTAGTTTATGATGTTTAATTTATTGAAAACAATAGCGTTAAATAT GATTTTCGACCATACATTTATTGCTCACGCTAATTTTAG
• Tissue: pods
• Gene name: LI_gene_127981;
• Additional information: details;

Expression of Ll_transcript_425654

FPKM

• PAB: 13.5
• PNAB: 14
• PS1: 9.1
• PS2: 9.8
• PS3: 12.2
• PW1: 9.4
• PW2: 7.6
• PW3: 8.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_425654

• Blastp: Bifunctional protein FolD 4, chloroplastic from Arabidopsis with 75.07% of identity
• Blastx: Bifunctional protein FolD 4, chloroplastic from Arabidopsis with 84.67% of identity
• Eggnog: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate (By similarity)(COG0190)
• Kegg: Link to kegg annotations (AT4G00620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426409.1)
• Pfam: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (PF00763.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;