Ll_transcript_425592

• Id Trinity: TRINITY_DN36375_c0_g1_i3
• Name Transcript: Ll_transcript_425592
• Sequence: CCTCCTTCATCTTTTTCTTCCACGACTCTCTTTTTTTTTTTTTTTCCATATTCTCATGTTTTGTACGCAAAAAAAACATAAAACAATGAAGTGCAATGTT TTGTTGTAAAATGTAGGAACCTTGCAACCTAATTGGGCATTTGGGTAATTCAGCATAACACTTTCCTTCACTCTCTTCCATTTCTGATTCAATTCAACTT TTCTTTGGAGATACGATTCTGAAGAACACTAAGGTTAATACTTTTTTCATTTTTCATTTTTCATTTCCCATTTCTTTGTAACTTCATTCACAATAAAAAC ATGCACAGATTTTGTAGAAAAACAATCCCTTTCTTCAATAATCTTGTATTTCCTCATCTTAGAACAAAACCTTTACTCATTGGGTATCAAAATATCACAA TTTCTCACTTCTTATCTACTACTACTACTACCTTTGATTCTCTACATTCACAACCCAATCACCATAAATCCCATAATACCCATTTTGGCCTTATTCAACT TCAACCCACTGCAACTATAAATGATCAATCCTATGATGAGTTTGCTTCTGATGTTGAGAAGCTTTATAGAATATTGAGAAAGTTTCATTCAAGGCTCCCA AAATTGGAACTTGCTTTAAAAGAATCCGGGGTCGTTATGCGCTCTGGGTTAACCGAACGTGTATTGAATCGCTGTGGTGATGCTGGTAATTTAGCCTATA GATTCTATTCATGGGCTTCTAAGCAATCTGGTTATCGACACAATCAGGACGTGTACAAAGCTATGATTAAGGTTTTGGGCAAAATGCGCCAATTTGGTGC TGTTTGGGCGCTCATCGAAGAAATGAGGCAAGAGAACCCTCAGTTTATTACGCCCCAGGTGTTTGTTATTTTGATGAGGAGGTTTGCTTCTGCAAGGATG GTTCACAAGGCAATTGAAGTTTTGGATGAAATGCCGAAGTATGGGTGTGAGCCAGATGAATATGTTTTCGGGTGTCTATTGGATGCATTGTGCAAGAATG GTAGCATTAAGGAAGCAGCTTCGCTTTTTGAGGACATGAGATTTAGATTTCCACCCACTGTTAAACATTTTACTTCCTTGTTGTACGGTTGGTGTAGAGA GGGTAAGCTTATAGAAGCGAAACACGTGTTAGTGCAGATGAAGGACGCTGGCATCGAACCGGATATTGTGGTTTATAACAATTTACTTAGTGGGTATGCT CTAGCTGGGAAATTAGGGGATGCATATCACCTTTTGAATGAGATGAGAGCGAAAGGTTGTGAACCAAATGCAACCTCGTACACAATTTTGATCCAGTCAC TCTGTAAACGTGATAAATTGGAGGAGGCAATGCGTATATTTGTTGATATGCAGAGAAATGGTTGTGAGGCGGATAATGTAACCTATACCACATTGATAAG TGGGTTTTGCAAGTGGGGGAAAATTGAAAGGGGTTATCAGCTTTTGGATCAGATGATACAGCAGGGCCATTCCCCGAATCAGCTGACTTATCAGCATATC ATGTTGGCCCATGAAAAGAAGGAAGAACTGGAAGAGTGCATGGAACTTGTGAAAGAGATGCACAAGATTGATTGTGCTCCCGACCTTAACATCTATAATA CAGTCATTAGGTTGGCTTGCAAATTGGGAGAGATCAAGGAAGGTGTTCGGCTTTGGAATGAGATGGAAGCTAGTGGGCTTAGTCCAGGCATTGACACATT TGTCATCATGATTAATGGGTTTCTTCAGCAAGGCTATTTAACCGAAGCCTGTGAGCATTTCAAAGATATGGTTGGAAGAGGGCTTTTTGCCGCCCCTCAA TACGGTACACTGAAGGAGTTGATGAATTCTCTTTTAAGAGCTGATAAGCTTGAAATGGCTAAAGATGTTTGGAATAATATCACAACTACCAAAGGGTGTG AGCTGAATGTAAGTGCATGGACTATTTGGATTCATGCACTCTTTTCAAAAGGACATGTGAAGGAGGCTTGTTCGTTCTGTATAGACATGATGGACGATGA TGATTTAATGCCGCAAGCTGATACTTTTGCAAAGCTTATGCGTGGTCTGAGGAAACTTTATAATAGGCATTTTGCAGCAGAGATCACGGAGAAGGTAAGG AAAATGGCTGCTGATAGGCAGATCACTTTCAAGATGTATAAACGGAGAGGAGAGAGGGACTTGAAAGAAAAGGCAAAGGAGAAAAAGGATGGAAGAAAGA GGAGAGCTAGACAACGTCGTTGGGAAGGAGGCCGTCAAAAAGCTAGTACATTATAATTTGCACAACTGAAGCTTCAAGCAACTCATTTGAATGGAAACTA AATGTTATCGGCTCTTGACTCAAAGACATAATTGGAAGACATTTGCAAAGCTGCTTCTTTATGAGGATTTATCGGTTGCTGATCATAGGAGTATGAGTTT CTGACTCCATGGCATCTTCCAGCTGCTTCATCTTCTTGTTTGCTTTTCACAAGTTCATTATTTGTACTTTATCTAACCTCAGACTTATGATTTAGTCTCA CACCTATTCCTGTAGGATACCTTGTCAAAGACCCCAAAAACATTGTTTTTCATAGTGCATGAGATGTAGTTTTATTTTATTTATCAAACAGTTTCATCTT TCTGGTGAGTTTTGAGAAACAATAATTAATGAATACCAAAAGCATAGTCATTGGC
• Tissue: pods
• Gene name: LI_gene_127998;
• Additional information: details;

Expression of Ll_transcript_425592

FPKM

• PAB: 0.4
• PNAB: 1
• PS1: 1.1
• PS2: 0.7
• PS3: 0.6
• PW1: 0.6
• PW2: 1.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_425592

• Blastp: Putative pentatricopeptide repeat-containing protein At5g65820 from Arabidopsis with 66.01% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g49730 from Arabidopsis with 70.43% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G65820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434720.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;