Ll_transcript_534124

• Id Trinity: TRINITY_DN36476_c0_g1_i1
• Name Transcript: Ll_transcript_534124
• Sequence: ATTGGGTCGGGTGAAGGGTTATAACCCAACGACTGTGATGTTGCATCCCCAACCCCGTCCACTTCAATGGCGACACTGAAACTCACACAACTCCAACACC AACACTTTTTCACACCCTTCTCTTCCTTACACCCTTTTCTACACTCCTTCTCATCTCTCCCACTCCCTAACCCTAACCCTAATCCCAACCATAACCATAA CATCTCTCTCTCACAACAGTTTCTGGTCGACAAAGTCATCTTCGCATTAAACCAAAACAACCCCACCTCACTCCGCAACCTCCTTCTCCGTTCCGCACCC GACCCATCATCACTCGTCCTTCAAGTCCTTCATCGATGTCGCCAATATCCTATTTTGTCCCACACTTTCGTCCAATCACTCTCTTCCACGTGTCCCAATC TCAACCACTCCTCCCTCTCCTTCTCCGCTATGATCCACGTTCTCGTACGCTTCAAGAAGCTTCCAGAAGCTCAGTCACTCGTTCTCAGAATGATTCGCAA AAGCGGCGTTACCCGTTTTCAGATTATTGAATCATTGGCTTCCGTTACTGATTATGGGGATTCTAATTTGAATTGTGTTTTTGATTTGTTGGTAAGGACT TATGTTCAAGCTAGGAAATTGAGAGAAGGGTCTGAAGCTTTTCATATTTTGAGGAGTAAAGGGTTTTCTGTTTCTATAAATGCTTCTAATGCTCTTCTTG GTGCACTTGTCAAGGTTGGGTGGGTTGATTTGGCATTGAATGTGTATGAAAGTGTTGTCACTAGTGGGATTCATATGAATGTTTATACACTAAATATCAT GGTTAATGCTTTGTGTAAGGATGGTAGAATGGATCATGTTAAGGGTTTCTTGTCAAAAATGGAGGGTAAAGGAGTTTTTCCTGATTCTGTTACTTATAAT ACTTTGATTAATGGACATTGTCGCCGAGGGTTAATGTCGGAGGCTTTTGAGTTGATGGATGATATGTTGAGTAAAGGGTTGAATCCCGGCCTTTTTACTT ATAATGCTATCATCAATGGTTTGTGCAAGAGCGGTGATTATGAGAGAGCGAAGGAGGTTTTGGATGAGATGTTGGGGATAGGGTTGAGTCCTGATGCAGC TACTTTTAACCCGCTGTTGGTGGAAAGTTGTAGGAAGGATGATATTTGTGAGGCTGAAAAGATTTTTAATGAAATATTGCGACGTGGGGTTGTTCCTGAT GTGATTAGTTTCAGCTCGGTTATAGGGGTGTTCTCCCGGAATGGATACCTTGATCGTGCATTAGCATATTTTAGGAATATGAAGGGTGCTGGGTTGGTTC CTGATACTGTGATTTATACCATTCTTATTAATGGGTATTGTAGAGATGGCAACATGTCTGAGGCTTTGAAAATGAGGAATGAAATGGTAGAGCAGGGTTG CATTATGGATGTGGTTACATATAATACTCTGTTGAATGGTTTGTGTAGGGGGAAGATGCTCGTTGACGCTGATGAGTTATTTAAGGAGATGGTGGAAAGG GGAGTTTTTCCTGATTTCTACACTCTCACCACTCTCATTCATGGCTATTGTAAGGATGGAAACATGACTAAAGCGCTTAGCTTGTTTGAGAGTATGACAC AAAGGAACCTTAAGGCTGATGTTGTGACTTATAATACATTGATTGATGGCTTCTGCAAAATCGGCGAAATGAAAAAGGCTAAAGAACTGTGGAGTGATAT GATAAGCCGGGATATATTACCGAACTACATATCCTTTAGCATATTAATAAATGGATTTTGCAGTTTAGGCCTTGTCTCTGAAGCATTCAGGTTGTGGGAT GAAATGGTAGAAAAAGGTATTAAACCCACCATGGTTACTTGTAATACCATTATAAAGGGCTATTTGCGGGCTGGCAATGTGTCCAAGGCAGATGACTTCT TGAAAAAGATGATGTTGGAAGGAGTTTTTCCTGATTGCGTTACATATAATACTCTTATAAATGGTTTTGTAAAGGAAGAGAACCTGGACAGAGCTTTTGA CTTGATTAATGACATGGAAGAACACGGGCTATTGCCTGATATTATCACTTACAATGCAATTCTGAGTGGATATTGTAGGCAAGGGAAAATGCAAGAGGCC GAAATGGTTTTACGGAAGATGATTAACAAAGGCATCAGTCCTGATAGATCAACATACACATCATTGATAAATGGGCATGTCTCTCAAGACAAGCTGAAAG AGGCATTTCGTTTCCATGATGAAATGCTGCAAAGGGGATTTGTGCCAGATGACAAATTCTAAGAATTGACTGTTGCACTGCAGCTGTTTAAACGTAACAA TCTTTGTTCTAAATTCCTAACATAAAGGTCTGATTGTGGACTGTGGCTATGCTTTTCCTTGGTCCAGATTCTGCATATCCAAGGAAGCTGAACCTCGGTG CACGCCTGCTACCCGACCATAAGATGTAAGGCAAACCTTGGAACCTTGGTTAGTAACAAATAATCAAAAAGGAGATGCTTGCTATCTATAAAGCTATGCA GTTATGAATGCCTTGACCTTGTTTCCCTCATGCTCATAAAGCTAACATTTAATAATAGTTCCTGGATTATTATAAGGCCTTATTTATATGTTGCATGAGC ACGTAATTAGATAATGATATTCTATCTTGTGACTGCCAATTGCCGTAGGCTGGGACCGCTGGGTTCCGAGTTGAAAGCTTTAGTTATATTAATGCAGATT AATCTGACATTTTGTAATACCAGGTTTCCTCCATTCATACATTCTCCCATCCAGATGGCAGAGAAGTTTCCATATTTATTTATATATTTTCTTGCTTGAA CTACCAAAGAAAAGGGTACCTTTACATGGAATTTATGGTTTCTTCTTTACTGATGAAGGGGAATCATGTCATTGCAAATTGCAACTATAAAGATACCAAC ATTGTGAGTCAAAGCATTCTTCCTCAAGTCAATTTTTATTGCAGCAATGAAAGTTTGTATAGCAGTTATATGCAGAAAAGATAAGGATATGGCTGTGGCT GGTTTGAATGATATAAATATGTTGTATCAGAACTGCCAAAATCCTTTGAAGTCATCATCTTTTGTGAAATGGTTTTGGAGATATTATTACAACTGTTTTA GAGCAATACTATAACATGGCTCTCAAATTCATTTTCTTTACAAAACTCAACTCACAAATAAGAACATGCCAACAAATCCTTTATATACTAAATCAATAGT GATAAACATTGGGGGTTTTTCATTAAGGTTTCATGTGTATTTTGAAAAATATTTCTATTGGGTCACTCCTTAATGTATATTTCCATGTATTAACTTGGAG CATTAGATATGATGAAAAATAAGGGAATCTTAT
• Tissue: pods
• Gene name: LI_gene_128091;
• Additional information: details;

Expression of Ll_transcript_534124

FPKM

• PAB: 1.3
• PNAB: 2.7
• PS1: 2.1
• PS2: 2.6
• PS3: 2.5
• PW1: 0.9
• PW2: 1.8
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_534124

• Blastp: Pentatricopeptide repeat-containing protein At5g01110 from Arabidopsis with 59.53% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g01110 from Arabidopsis with 59.53% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G01110)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461058.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;