Ll_transcript_534073

• Id Trinity: TRINITY_DN36479_c0_g1_i2
• Name Transcript: Ll_transcript_534073
• Sequence: CTCTGTAATTGCAATATTGCGATTTCGGGAGTTTCCGCAACGACAATCACAACAGTAATTGCGGCTGCATCAGTCGCATTTTCCGCAATTGCTGTAATTG CATTTTGAAACACTGGATCATAGTAATAGCTTAAAAGAAATCTAACCTACTATAAAGGTATTTTATTTGATGAATAGAAATCTTAGTAGTGAAACATACT TTATCAAAAGTTAATAAGGAATGAATTACATTCAAGATTCTGCTGAAAACCATGAGACTCTGGTTTGTGTTCTGAAGTCATTTTAAATGAACCATTTTGG AACAATCCCATTTTCATTATGATCAGAGGATGCACTATAAGACTGTTCTTTTTACATTACTTTTTTTGGATATGATAGAAGACAACGAAATAAAAATGGA AATTTCTTTCTATGACAAATTTGATTGGAGTTTATGTACTTCTGTATTATACAGTGTGGATTCAAACAGCAGAGTTTCTGTGGTTTACTTGGAGCATATC TCAACTACTGATATAGGAGTGTATGATGTGGTCGTTCTACCGAGTTTTGTACCTTCAATGGACAGTTATGTCCATATTTTGACAAAGATGGCCCGCGGAA GTGTCAATGGGGTATTACACAGTTCCTTAACAAAAAGAGATACAGAACTTGCTGAACCACTGGTCGAAATTCTTGAACAATGCGGGCAGAAAGTGCCTCC TACCTTGAAAGATTTGCAGAACACATCAAAATGAGGGAAGATTGAATGTTTAAGGGTTTGATGATTATAATCATATTACGATTGGAAACCTTATTGGATA TGAAATGCTACAGCAAATGAAGAACCTCAATCATCAGAAAATTTTTGCCATATTATTTATGTTGCTTCTATTTCAAAAACTATTTCCTGTTTAAGTTGAG TGAAGGACAATGACATTTATACATCAGCAATTTGAGCTGCACAGATTAGACACATGGGGGCACGATAATAATTTGGCACATGTATTCAATGAGGGAGCAC ATCTTCTGTTTACAATATGTCCCTCCATGTGTCATAAGCTGTGATTGGTTGAAGAAAGTGTCTGTGCCTGTGATGTTAGCAAGCAGAGTTGTTTAGATTA ATATTTTCTTTCGAAATTTGTTTCTCTTTATCCAAACAAGAGAATGTTTTAATTTTGAATTTTTCCTGTTTGGTCCCTTTACCCTCTATAATATGCAAGT GCTGATAGCTACTTCTAGGAGTATGCTTTTGGCTTCCAAATATATTCAGGTCGTACTAAAAAAAATACAGTGTGATAAGTTAGCATTCAC
• Tissue: pods
• Gene name: LI_gene_128094;
• Additional information: details;

Expression of Ll_transcript_534073

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.2
• PS2: 0.1
• PS3: 0.3
• PW1: 0
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_534073

• Blastp: DEAD-box ATP-dependent RNA helicase 5 from Oryza sativa with 36.36% of identity
• Blastx: -
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (4342981)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449808.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;