Ll_transcript_452828

• Id Trinity: TRINITY_DN36547_c0_g1_i1
• Name Transcript: Ll_transcript_452828
• Sequence: GGTGTATATAAATTTTTACACATTTAAAAGAACATGTGTTTTCTGTCCTTAGGGCAAAGAAAATATTTTGGGGTGGCATTTGGCAAAGACGAAAAAAGAA GAGTTGAGCAGAACACAGCGAGCGTAGGCAACAGCAAAGAGGAGTGTGTAGTAGGAGCGTAGGGTGAGATGGGTAAAGGTAATCCCCCGAAATCAAATAC CGGCGACGACCTTCATGCGGCGGCAAGGTCCGGTGACCTAATTGCCGTTCATTCAATTTTGGCCTCAAACCCTTTGGCTGTTAATTCCAGAGATAAGCAT TCCAGAACACCACTACATTTAGCAGCATTTTCTGGACACGCAGAGGTAGTTAGTTATCTCTGCAAGAACAAGGCTGATGTTGGTGCTTCTGCTATGGACG ACATGGCAGCTATACACTTTGCTGCTCAGAAAGGACATTTAGAAGTTTTCCGGGTTCTAGTTTCAGCTGGTGCCTCTTTTAAAGCTTCTACCCGAAAAGG AATGACTTCATTACACTATGCTGCTCAAGGTTCCCACCTGGAACTTGTCAAGTACTTGGCCAAGAAAGGGGCCAGTCTTAGAGCCAAGACAAAGGCAGGA AAGACCCCATTGGATCTTGCTACTAATCAAGAAGTCCGCTCCTTTCTAGAGGAATTTGAAAAATCAGCAAAGAATGGAGAAGTGAGAAACAAAGATGAAG CGGAACAATCTGTTCCAGAATTAATTAACAAAGATAAAGATGATGAATCTGATCCAAAGACATCCACATTGGGATCGGAAGATAATTTGGGTGCTGAAAC TTCTGCAGCTGCTGTTGATGAAGAAAACAGTGAGAGAGAGAAGAGAAAGGGTGATGCAGATGACACAAGGGAAGAGTCGGCACAACCAAAAAAGGCAAGA GTTAAGTTAAGCCATCTCCAAAATTCAGATGACAACCAAGAAGAAGAAAACCTGTAGGTTGTCAGAGGCAGACATAGAACATGTTTTTGTCATATTAATC TGTATTCTGTATTGGTACCTGATTTGGAACCTCAGTTGTGTTGGTAGACTTGGATTATCTATTTGACTGTTTATGAATATATCTTCTGTGCTAATACAAT TTTATCATCTTGACAATTTCTCCTCCTATTTGTTGTCCTGCCACATTCCCTTTCAGCAGATACTTTGGGTGTCCTTTTTGTTGTAAGACTCAGATGTTAG TCTCTTTACTTTTAC
• Tissue: pods
• Gene name: LI_gene_128151;
• Additional information: details;

Expression of Ll_transcript_452828

FPKM

• PAB: 8.6
• PNAB: 13.9
• PS1: 19
• PS2: 11.5
• PS3: 17.2
• PW1: 12.5
• PW2: 11.9
• PW3: 9.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_452828

• Blastp: Putative ankyrin repeat protein RF_0381 from spotted fever group with 37.41% of identity
• Blastx: Putative ankyrin repeat protein RF_0381 from spotted fever group with 39.07% of identity
• Eggnog: In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance (By similarity)(COG0317)
• Kegg: Link to kegg annotations (RF_0381)
• CantataDB: Link to cantataDB annotations (CNT0001169)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445221.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;