Ll_transcript_452829

• Id Trinity: TRINITY_DN36547_c0_g1_i2
• Name Transcript: Ll_transcript_452829
• Sequence: GGTGTATATAAATTTTTACACATTTAAAAGAACATGTGTTTTCTGTCCTTAGGGCAAAGAAAATATTTTGGGGTGGCATTTGGCAAAGACGAAAAAAGAA GAGTTGAGCAGAACACAGCGAGCGTAGGCAACAGCAAAGAGGAGTGTGTAGTAGGAGCGTAGGGTGAGATGGGTAAAGGTAATCCCCCGAAATCAAATAC CGGCGACGACCTTCATGCGGCGGCAAGGTCCGGTGACCTAATTGCCGTTCATTCAATTTTGGCCTCAAACCCTTTGGCTGTTAATTCCAGAGATAAGCAT TCCAGAACACCGTATCCTCTTTTTCTTTTCTTATTATTCTATCAATTTATTAACGTAATTGGAACCCTATGATTTTGTTTGTTTCCCTCTTAATCCAATA GCTTAAGTGGAAGGAAATAGTTGTTAATGTTATTTCTGCTAATTTTCACACCACATTGGCTATATCCTATAGTTAACATTTGGATGCGTCTTACAGTGAT GCTTTTTCCTTTTGATTTTATGTAGTTTCTTTTCCATGTAATGTGTATTTTACCTATCTTGCTTGAACCATTGATTTTATGACTTTATTACAGAACTATA ACCCCAAATACCAGTGGTTTTACACTTTTACTAATAATTCAGTGTATGTTTTTAATGTTAAAGTCATACATCTTTCTCTATGAATATGGACTGTTGATTA TCTATTCATATTACATGATTTTGTACAAGTCAGAAGAATTGGAAGCAATTTTTTAAAAACTAAACTGGATATTGAACTGACAATGGCTACGCGTTATGGT CCAATTGGTTCAATATTCCAGTTAGGTCAAACCGGATAAACCCAATTAGAAACAATTGGAGTATTGGAGTGTGAACATGGTCAGTTCAGGGTTTATCTGG TTGGTCTGCTCTGGATTTTAAAACATCGATAGGAAATAAGAAGAAAATAAAATTTTACCTGGGTTAAGTGACTATATTTTTCTTGGGATTTCTAGCATTT TCCACCTTGTTTCTTTAACAGGCTACTTTGGATCATAGACTACATTTAGCAGCATTTTCTGGACACGCAGAGGTAGTTAGTTATCTCTGCAAGAACAAGG CTGATGTTGGTGCTTCTGCTATGGACGACATGGCAGCTATACACTTTGCTGCTCAGAAAGGACATTTAGAAGTTTTCCGGGTTCTAGTTTCAGCTGGTGC CTCTTTTAAAGCTTCTACCCGAAAAGGAATGACTTCATTACACTATGCTGCTCAAGGTTCCCACCTGGAACTTGTCAAGTACTTGGCCAAGAAAGGGGCC AGTCTTAGAGCCAAGACAAAGGCAGGAAAGACCCCATTGGATCTTGCTACTAATCAAGAAGTCCGCTCCTTTCTAGAGGAATTTGAAAAATCAGCAAAGA ATGGAGAAGTGAGAAACAAAGATGAAGCGGAACAATCTGTTCCAGAATTAATTAACAAAGATAAAGATGATGAATCTGATCCAAAGACATCCACATTGGG ATCGGAAGATAATTTGGGTGCTGAAACTTCTGCAGCTGCTGTTGATGAAGAAAACAGTGAGAGAGAGAAGAGAAAGGGTGATGCAGATGACACAAGGGAA GAGTCGGCACAACCAAAAAAGGCAAGAGTTAAGTTAAGCCATCTCCAAAATTCAGATGACAACCAAGAAGAAGAAAACCTGTAGGTTGTCAGAGGCAGAC ATAGAACATGTTTTTGTCATATTAATCTGTATTCTGTATTGGTACCTGATTTGGAACCTCAGTTGTGTTGGTAGACTTGGATTATCTATTTGACTGTTTA TGAATATATCTTCTGTGCTAATACAATTTTATCATCTTGACAATTTCTCCTCCTATTTGTTGTCCTGCCACATTCCCTTTCAGCAGATACTTTGGGTGTC CTTTTTGTTGTAAGACTCAGATGTTAGTCTCTTTACTTTTAC
• Tissue: pods
• Gene name: LI_gene_128151;
• Additional information: details;

Expression of Ll_transcript_452829

FPKM

• PAB: 3.8
• PNAB: 4.8
• PS1: 3.9
• PS2: 3.1
• PS3: 4.8
• PW1: 2.8
• PW2: 3.3
• PW3: 3.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_452829

• Blastp: Ankyrin-1 from Homo with 40.86% of identity
• Blastx: Ankyrin-3 from Homo with 44.44% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (286)
• CantataDB: Link to cantataDB annotations (CNT0001169)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445221.1)
• Pfam: Ankyrin repeats (many copies) (PF13637.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;