| Id Trinity | TRINITY_DN36703_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_317728 |
| Sequence | GGTTCGGATGCGAACCTCGTGATCGCGCTTTTGAACCGTTGCAAGGGTTTGCTCTTCGGTTCGTGCGAGCACCACACTGAGCTAACGAAACAGTTCATGG CGTTCGGGAAAAGCTTGTTATCGAAGAAGAATAACAAAAACGAAGAGCAAGGGCATAACGGTAATTTAAGTAATTTGAGCGAAGCGCTTAAGCTGATGAA TGAAGCATTGGAGGTTTGTGAGAAGGGATTGAGTGTAGCGAGAACACAAGATGAGAAATTGGAACTCAAAGGTTTAAGATGGAAGGTGCTGAGATTTATT GCTGCAATTCATTTGCAAAAAGAAGAATTTGAGAGTGTGATTAAGTGTGTAAAGGTTTTAAGAGATGGTGGTGGTGGCGGTGGTGACAGTGGCGGTGATG GTCATCCGAGCCTTTCGGTGTTGGCGATGAAAGCTTGGTTGGGGTTGGGGAGGCACGTGGAAGCAGAGAAGGAGTTGAGGGGGATGGTGATTGATGAGGG GATTCCAGAAGGTGTGTGGGTGTCTGCTGTGGAGGCTTATTTTCAGGCAGCGGGGACCGCGGGGGCGGAGACTGCGAAAGGGGTGTTTTTGGGGCTGTTG GGAAGGTGCCATGTGAGTGCCGGCGCGGCAGTGAGGGTGGCACATAGGGTGGTCGGAAGCGGCGGAGGTAGTGAAGGGTCTAGAGTGAGAGCTAAAGTAG TTGCTGAACTTGTGTCTGATGAAAGGGTGGTGGCACTCTTTGCAGGACTGGGAGCTGCTAAGGATAAGGTGGCAATGCATGCAGTTCTCTGGAATTGTGG TGCTGATAATTTTCAATCTAAAGATTATGAGACCAGTGCAGAACTCTTTGAAAAATCAATGCTGTATATTCCAAATGATACAGAGAACCGGATACTTCGA GCCAAGGGCTTCAGAGTTTTGTGCCTCTGCCACCTTGGTCTCTTGCAGCTAGATCGCGCAGAAGAATACATCAATGAGGCTGAAAAGCTTGAGCCCAACA TTGTCTGTGCTTTTCTTAAGTTCAAAATTTATCTCCAAAAGAATGACCTCCAAGGCGCAATTAAGCAAATTGAAGTGATGACAACATGCCTTGACTTTCA ACCAGATTTTCTCTCACTTTCAGCCCATGAAGCTGTTGCTTGTCATGCTCTTCCTGTTTCTGTTGCTGCTTTATCAAGCATGCTCAACTTCTATACTTCA GGAAGGTCCATGCCAACAGCAGAAGTCACAGTTCTTCGTACCCTGGTAACAGTTCTCTCTCAAGAACCGGGTAATGAACAGCACATCCACAAATTCTTAA GACATGCCTATAGCAGAGCTTCTGATCTTGGTCCTGATTGTTTCTTTGGAAAAGAAGAGGTTGGAAGACGGGAACGGAATTGGTTTGCGGTAACTGCATG GAACTGTGGCACAAAAACTGGGCAGAATAAGAACTATGAATTGTCTGCTGAGTTCTTGATACTGGCATCGGACTTTTATGCTCTGCTTGAAGGGTCTGGT CACGAGACCAATGTAATGGTTTGTAAATCATTAGTCCTTGCTGCATCATCAATGATAGCTTCAGAACTTCAAACAAAGACGGCTATGTCAGAAGCTGAAG TCAAGCAAGCTGTACAATTGCTAGATAGAGCAGGGAAGATGGTAAAGTCAATTTCAGCTGGGAACTTTGTTAATGAAGATCAAACAAACACCATTGAATC TGACCTCTTTTTCATATACACTTTCTGTGCTTATGATATACAAGGCAGGCTAAATGACATAGGTTCACAACTTGTAAGTGTTAAAAGTTTCGCGACTTCA AAGGCTTGTAAACCTCATCACCTCCTTCAATTAGGCCTCTCCGCCTCCCAGGGACCGCGATCCAATCACGAAGTAGCCACATTTTCTCTAAACGAATGCC TCTCATCATTCCTTTCATCCCCTAATCCAGATTACGAAAACATAGCTCTCGTAATTCGCAAGCTTATAGCCATTGCTAGCATTCACAAGGGTGATACAGA TGATGATGCTGTATATGGAATGTACAAGCAAGCCTATAGGATAATGATTGGTTTGAAAGAAAATGAGTATCCAATTGAAGAAGGAAAATGGCTAGCCATG ACTGCATGGAATAGAGCATCATTGCCTATTCGGTTGGGTCAGATTGAAGTTGGGAAGAAATGGATGAGTGTTGGTTTAGACATTGCAAAACATGTTCCTG GAATGGAGGCTTATAAAGCATGCATGGAAGATCTTGTTAGGAGTATGGAGATAAAACTTTGATAGGTATCAACCTTAAATCTGGTTTAGTACTTACAAAA TGTATACTTTTCTTATTGGAAAGAAGACATAATGTAGAAGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_128286; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_317728
| Blastp | TPR repeat-containing protein ZIP4 from Arabidopsis with 61.59% of identity |
|---|---|
| Blastx | TPR repeat-containing protein ZIP4 from Arabidopsis with 60.79% of identity |
| Eggnog | Testis expressed 11(ENOG410XQC2) |
| Kegg | Link to kegg annotations (AT5G48390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451471.1) |
| Pfam | Meiosis protein SPO22/ZIP4 like (PF08631.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |