Ll_transcript_317742

• Id Trinity: TRINITY_DN36713_c0_g1_i1
• Name Transcript: Ll_transcript_317742
• Sequence: TCTCTTTTAAAGTGTGTGACTATTCTCTTAGTGAATATCGCTATCAGGAATCAAACACTGACTACTATCTTGTCATCGTGAGATCTAGTTGGGCTTTCAC ATTTTGTGTATGACCTCAATAATTTAGTGAAGACTTAATTTTATGGGCCGCACCTACATGCCCAAAAGAAAGCCCGTTGATTTGTTTACTGAGACCCCTA CTCCGATAAAGAGTCCTCCTCCTCCTCCTCCTGGAAATAAATGGAAATGGAACAGCTAGTGAGCATGGGTTTCCCTGAGGATATAGCCGCCGAAGCCTTG GCTGCTACCGGCGGCCAATCCACCATCAAAGCCACCGAATGGATTCTCTCTCAAAAATCCTCCACTTCCTCACCTCCTAAATCTCAATCTAACCTCGACC ACTTCTTCCTCTCTTCCTCAACCAAACGCCTCAAACCATCATCATCACCCTCACCCTCACCCTCCATTCCCAACTCTTCTAAAACCAAACACCACCAACC CTTATACGAGCGCTTACGTCCTACCACCTTAGACGACGTCGTTGGTCAAGACCATCTCCTCTCTCCAAATTCTCTCCTACGCTCTTCCATCCACCGCAAC CGCCTCCCTTCTATCCTTCTCTGGGGCCCACCCGGTACCGGTAAAACCACTCTCGCCAAAGCTATTGTAACTAACTCCAAATACCGTTTCGTTTCATTAT CCGCCGTCACCAGCGGCGTTAAAGATGTTCGCGACGCCGTTGATGAAGCTAGGAAACTTAGGCTCAAGACTAATCAAACTACTGTTCTATTTGTCGATGA GGTTCACCGTTTTAACAAGTCTCAACAGGATTCTTTCTTACCTGTTATTGAAGATGGTAGCATTGTCTTCATTGGTGCCACCACTGAGAACCCTTCTTTC CATTTGGTTACTCCTTTGTTGTCGCGCTGCCGTGTCCTTACGCTTAACCCTCTTCAGCCTCGGCATGTTGCCGTGCTGATAAATCGCGCTGTTGATGACT TGGACAGGGGGTTAGCCCGGAGTGTTGGATTTCGAGTTGGTGTTAATCAGGATGTGGTTGATTTCATAGCAAATAATTGCGATGGTGATGCTCGTGTGGC GTTGAATGTGTTGGAGATTGCTGCTGTTACGGCCGCTGCGAGGGTACAGCGTAAAGAAGATGACACGACAATTGATGAATGCGAAGTTAGTGTTACACTT GATGATGCAAAGGAAGCACTTCAGAGCAAACATCTTGCTTATGACAAAGACGGGGAGGAGCATTATAATCTGATTAGCGCGCTGCATAAGTCTATGAGGG GGAGTGATGCTGATGCAGCAATTTATTGGTTGGCAAGAATGTTGGAAGGAGGGGAAGAGCCTCTTTACATTGCGCGTCGACTAGTTAGGTTCGCGAGCGA GGATGTTGGTTTGGCTGATCCGTTAGCTTTGAGTCAGGCTGTTTCATGTTATCAAGCCTGTCATTTTATTGGGATGCCTGAGTGCAATGTCATTCTTGCA CAATGTGTTGCTTACTTGGCATTGGCTCCGAAATCGGTTGCAGTGTATAAAGCAATTGGCGCTGCACAGAAGGTAGTGAGGGAATCGGTTGGACAGAATG AGGGAGTGCCTCTTCATCTAAGGAATGCACCAACCAAATTAATGAAAGAAGTTGGGTATGGGAAGGGATACATATACCCTCCTGATAATCCCAACACATC ACAGACCTACTTACCACCCTCACTTCAAGGGTACAAGTTTCTCCATTGGCCTCATAAGGATTCGTCTCACTAATGGATAAAAATGTGTTTTTTGTTTTGT TTGAATAGACACAATGCCTGTTTATATTTTCCCACCATCATTTTCTAGGCACTTCTTAGAAGTTAGAAACATGTTTATGATATAGGAGGGTGGTAAATAC AAGTGTAATGCATCTTGCAGTTTTTGACTTTATACTAAATCCTCCTCATTTTGGTGAACTTATTTTTGCTTTGTTTTTTTGTTTTTTATTATAATATTCA TATGATATACTCTATTAAAAA
• Tissue: pods
• Gene name: LI_gene_128294;
• Additional information: details;

Expression of Ll_transcript_317742

FPKM

• PAB: 1.7
• PNAB: 1.9
• PS1: 2.5
• PS2: 2.3
• PS3: 2.1
• PW1: 1.4
• PW2: 1.9
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_317742

• Blastp: ATPase WRNIP1 from Rattus with 51.03% of identity
• Blastx: ATPase WRNIP1 from Rattus with 51.03% of identity
• Eggnog: Recombination factor protein RarA(COG2256)
• Kegg: Link to kegg annotations (282835)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459115.1)
• Pfam: UBA/TS-N domain (PF00627.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;