Ll_transcript_510825

• Id Trinity: TRINITY_DN36884_c0_g1_i1
• Name Transcript: Ll_transcript_510825
• Sequence: CTTTAACCTAATCTCACAATATATAAGGCTAAGAATTGCCGTCAAGGTGGGCGTATTCTCTTGTCGTCCTATATACTTGAAATTGACAATGTTGTCTAAA TTCTTCAATTAAAGATCTATCGCTACTGTCAGATGATGAAGGTAGGAATTCCAAATTATTTAGTACTTTCACCTTAGAGAGACTCGACGAAGATATTTGG TGTTCACTTCACTCCAACTCTTTATGCAACAGCAATAGCCAGTGACAGTGGATAATTAAGCAAGGAACTTTTTCTTTGAAAGTACTTCTTGAACAGCCAC ACAACCCCAATGAACATGAATCAGAGGAACCATCCAAACTATCTTCACCCACAACCAAATCCTCAAATCCCAAGTGGTGCATCTCACTTTCCTAGTCACT TACCAAATCCTCAAACCCAAAGTGGTGTATCTCATTTCCCTAGTCACTTTCAGTTGCTTCTTGCACAAACTCAGTATGCACATGCACTTGCTCAAGCACA GATACATGCCCAGTTGCAGTCTCAGTCACAAGCTCATGCCACATTGCAACCTCGCCCTTCACATCCTTTCTTACAATCTCAACCTCACCCTTTTGTTGCC AACTTGCATAGCAACACAAATACTAATGTTGGCAATGTTGCTAATACTCTGGCTGCATCCGGAAGCGCAAATCATCGGCCGAATCTAAGGCCTATTCGAC CAAAGAAGAAGGAGCCATCACAGAAACAAAGGCTTGAAAAGGTTGCTCCACTTCTACCTCAGTCTCCTTTGTATACCCAGTTAATTGATTTTGAGAATCA GGTGGATGCTGAAATGGCCCGATATAAATTTGAATTACAAGAGGCTTTCAAAAGACCTTCTTATGTTCAGAAAACTCTTCGTGTTTATGTGTTTAATACC TTCTCAAATCAGAATATATTTACCAACAAAAATGGTGAGGAAGCTTCTTGGTCACTCAAGATAGTTGGAAGGATATTGGAAGATGATAAGGATTCTTTTG AAGCTGGATCTTCTTCACAAGGATCAAAAAGTCCTTCATGCCCAAAATTCTCCTCATTTTTCAAGAAAATTGCTGTATACTTGGACGAGAACCTTTATTC TGATGATCATGTCATTATATGGGACAATGCTCGCTCTCCTATTGAACAAGATGGTCTTGAGGTGAAGAGAAAAGGTGACAAAGAATTCACTGCAAAGATC ACAATGGAATTGAAGAATGTACCTGAGAAGTTTATGCTTTCACCACAACTATCTAAGCTTTTAGGGTTTCAGGTTGAGACTCGTCCTAGAATAATAGCTG CCCTTTGGCACTATATCAATTCTAGGAAGCTAGAAATCTCAAATGACCCATTCTCATTCATTTGTGACCCTTCTCTCCAAATGCTTTTTGGGGCAAATAA GATGGAATTTGAAGAAGCTATTAAGAAGTTACCACAACATTTGTCACTCCCACAACCTATTAATTTGGAGCATGAAATCAAGCTTTCTGGAAATCCTACT TCTGATACTGACTGTTATGATATACAAGTTTATGTGCATCCTCCATTGGACAATGATATTTCTTCAATCTTGGCAGGTCGTGAGAGTCAAAAGCAGATTG AGTTTTTTGATGATGTAATTAGCTCTTACATTAAGAAGGTTCATGAACATCAAAGAAGAAGGGCATTCTTTCATAGCTTTAGTCACTCTCCTGAAGATTT TATCAATGCTACGATCGCTTCTCAGAGTAAGGATATGAAACTTATTGCTGAACATGCTAGTGATAATGCTGCAAAGAAACAACGTTCCAAATTCTTCAAT CAACCATGGGTTATGGATGCGTCCATTCGATACTTGAACCGCAAAAATGCTGGAAATGATGCACCTGGAGGCTCCTAAGAAAAGGTTATAAAAGTGGCAT CCCCTTCCAAAATTTAAAATAAAAAAAAACAATATAAAACTATACCTGCTCTATGTTCTTCTTATGTTTTATAATCTTCTCTATATATAGTGTTACAATC CTCATACAATGAACATATGAGGGAGAAAAGAATTCTAGTAATTTATTTCCGAGTTTGTAGAAATCATGGAGGTGAGAATACCCTG
• Tissue: pods
• Gene name: LI_gene_128444;
• Additional information: details;

Expression of Ll_transcript_510825

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 1.1
• PS2: 4.6
• PS3: 7.7
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510825

• Blastp: SWI/SNF complex component SNF12 homolog from Arabidopsis with 53.81% of identity
• Blastx: SWI/SNF complex component SNF12 homolog from Arabidopsis with 51.52% of identity
• Eggnog: SWI SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member(COG5531)
• Kegg: Link to kegg annotations (AT5G14170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429258.1)
• Pfam: SWIB/MDM2 domain (PF02201.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;