Ll_transcript_297638

• Id Trinity: TRINITY_DN37093_c0_g1_i1
• Name Transcript: Ll_transcript_297638
• Sequence: CATGGTTGGATGAAAGTGGGTGGGTCATCATGAAAACTAGACAAGATGAGGAATAGTTCAATTTTTCAACCCAAATTCGGATTTAGGATTGGGTAAGGTC AAACCCAAACCCATTCCTTATCATTCCAACTACCTTCTTCTCGCTTTCTCATCAGCATCGCATATTAGGGTTTTCGTTGTTCCACTTTCGAAATTTCATT CTTCAACTCATTCTAAATCCAATTCCATTATTTTCTTCTATCCCTATTCACTCAACTTCAAAACAATGAACGACGACGTTTTCGATACCCACAAAATCCG AAACATGTGTATCCTTGCACACGTGGATCACGGCAAAACCACCCTCGCCGACCACCTAATCGCCGCCGCAGGCGGCGCCTTACTCCACCCTAAACTCGCT GGGCGCGTGAGATTCATGGATTACCTCGACGAAGAACAACGACGCGCCATAACGATGAAATCTTCCTCAATTTCCCTCCATTACAAGGATCACTCCATCA ATCTCATCGATTCCCCTGGCCACATGGACTTCTGCAGCGAAGTCTCCACCGCCGCGCGTCTCAGCGACGGCGCGTTAGTTTTAGTCGACGCCGTCGAAGG TATTCATATTCAAACCCACGCGGTTTTACGCCAGTGTTGGATTGAGAAACTATCCCCTTGCCTCGTGCTTAATAAAATTGACCGGTTAATTACCGAGCTT AAGTTAACTCCCTCGGAGGCCTACACGCGCTTATCGCGAATTGTTCACGAGGTGAACAACATCGTGAGCGCGTATAAGTCGGAGAAGTATTTATCCGACG TGGATTCCATTGTGGCTGCCGCCGGAGCCGGTGGTAGCGAGGATGAAGAGTTTGTGGAAGATGATAATGATGATGAGGAGGATACATTTCAGCCGCAGAA AGGTAATGTGGCGTTTGTTTGTGCTTTGGATGGTTGGGGGTTTAGGGTTCATGAATTTGCTGAGTTTTATGCTTCAAAGCTTGGTGCTAGTGTTAATGCC TTACAGAAAGCTTTGTGGGGCCCACGGTATTTTAATCCGAAGACGAAAATGATTGTTGGGAAGAAAGGGATTGCAGGTTTTGGTGCTGGTGGGAAGGTGG CTAAGCCTATGTTTGTACAGTTTGTGTTGGAGCCGCTTTGGCAGGTTTACCAGGGTGCATTAGAGGGGAAAGGCTTGGTTGAGAAAGTTGTTAAGGCATT TAATTTGTCGATTCCGGCTAGGGAGCTTCAGAATAAGGATCCTAAGGTTGTGCTTCAGGCGATTATGAGTCGTTGGCTTCCTCTTTCAGATGCAGTTTTG TCTATGGTAGTGAAGTGTATGCCAGATCCCATTGCAGCGCAATCATTTCGTGTGTCTCGCCTGCTTCCAAAGCGAGAAGTTGTTAATGGGGTTGAGATTG AGATCGATCAGACTGTGGTGGAAGAGGCAGAGCATGTGAGGAAATCAGTTGAGGTGTGTGATTTGAGACCTGATGCTCCTTGTGTTGCTTTTGTGTCGAA GATGTTTGCCATTCCAGTTAAAATGCTTCCGCCATCGGAGAATGGTTATGGTGATGAAGGAGAGGGTGATTCAGATGAGTGTTTCCTGGCATTTGCTAGG GTCTTTAGCGGGGTTCTTAATGCAGGTCAAAGAGTTTTTGTGCTTTCTGCTTTGTATGACCCATTGAAAGGGGAATCGATGCAAAAGCATGTGCAGGAGG CTGAATTGAAATCTTTGTATTTGATGATGGGACAAGGCTTGAAAGTAGTGAAATCTGCCAAAGCAGGAAATATCATTGCTATCCGAGGCCTTGGCCAGCA TATATTGAAAAGTGCTACTCTTTGTTCTACTAGGAACTGTTGGCCTTTTTCGAGTATGGAATTCCAAGTTGCCCCGACTTTGAGAGTTGCAATTGAGCCT TCTGACCCTGCAGATGTGGGTGCACTGCTGAAAGGATTGAGGCTTCTGAATCGAGCTGATCCATTTGTTGAGGTTCATGTTTCTGCAAGAGGGGAGCATG TTCTTGCTGCAGCTGGGGAAGTGCATCTCGAAAGATGCATAAAGGATTTAAAGGATAGATTCGCGAAAGTAAACTTGGAAGTGTCACCGCCTCTTGTGTC GTATAAAGAGTCCATCGAAGGGGAGGTATCCAACATGCTGGAGAATTTGAAGGCTCTTCGTAAGAGCTCAGATTATGTTGAGAAAACAACACCCAACGGA AGATGTATAGTACGAGTGCGTGTGATGAAACTTCCACTTTCTCTTACGAAAGTGCTACACGAAAGTTCTGATTTACTTGAAGATATCATTGGTTTAAAGT CTGGTCAGACAGTTAAAAGTTTGGAAATCCTGGGAATGAGTATTCTCAAAAATGATAATCCAACTGAAGTGCTAAAAAAGCGTGTAATAGATGCAGTGGA CAGTGATATCATGAGCAGGATTGAGAATGACAAGGACCATACTGACAAGGACCATACTGACAAATGTAAATTGCAGTGGCTAAAGCTTCTGAGGAGGATA TGGGCACTTGGACCTAGGCAGATTGGTCCCAACATTCTCTTTACTCCGGACATTAAAGCAGCAGAGTGTGGCGATGGATCTGTTCTAATACATGGTTCTT CTCACATAGCTGAAAGGTTAGGCTTTACGGCTGATTCTAATAGTGCTCACTCAGTCATTGAGACACCTTCAGACATGAGCCATGCTTTGTACACGGATGT TGAATATCTTGAGAGTAGTGTTGTATCTGGGTTTGAACTAGCTACTGCGGCTGGACCTTTATGTGATGAACCTATGTGGGGTTTGGCATTTGTTATTGAA GCTCGGATATTTCCGTTTACAGGGCAGTCTGATGAATCTGAAACACACCAACAATCTGAGCAGTATCGCATTTTGGCAGGGCAGGTAATTGCAACTGTCA AGGATGCCTGCAGAGCAGCCGTGCTTCAGAACAAGCCACGGCTTGTGGAAGCAATGTACTTTTGCGAATTGAATACCCCGACTGAATATTTAGGTCCCAT GTATGCTGTACTTTCCCGAAGACGAGCCAGGATTTTGAAGGAGGAGATGCAGGAAGGTTCTCCTTTCTTCACTGTTCATGCATACGTTCCTGTCTCTGAG AGCTTTGGTTTTGCGGATCAGCTTAGGAGAGGGACTTCTGGTGCTGCAAGTGCACTTCTTGTCTTTAGCCACTGGGAAGCACTTTCTGAGGATCCTTTCT TTGTACCTAAAACAGAAGAGGAAATTGAAGAGTTTGGAGATGGTTCTAGTGTTCTGCCAAATACAGCAAGAAAGTTAATCGATGCAGTCAGACGGCGCAA GGGACTTCCCGTGGAGGAGAAAGTAGTACAGCATGGAACCAAACAGAGGACACGAGCTCGTAAAGTTTGACATTCATCATTAATTATTGTTTTGCCCTGG CTCTGAAGACAACCTGTATTTGTTGAATGTATGTGTAGTTCATACTTCATAGGTCATACACTGTATCTTTAGGAACACTTTTTTTCCAGCATGAGTGTTT GTTGTAGTGCATCACTGAAGTTTTGTGCCATTTTCCATTATATGTCTAAATATACCCTACAATTTTGCTACTCTAGTTTTTGCACAAAATAGCTTTTCAG CTAAATGCTCTCTATGTACTATGCAGAATTTTGAATATAAGCTTATCTGAATACAAAATTAGCTTATCTAAAGGTTCTATGTGTCAAAATAAAATTTTAT TATCTGAATAAAAATTCATAGTTGGACAGGTTACTCTAATTTAGAAGGAGAGAGTCAAAAAACCCATAGGTAAAAAGTAAAACCAAGTAAGAAAGATGTA GAGATCAATGTTTTGCCAATGTATGTGATTTATGATAGAGTATTATAGCGTATTTCAATTCATGTAGCTGATTCCACCCGGTTGCATAATAACAACCAAG CCTTAATACCACTAGGTAGTTTTGGTTAGAGAATTGGCAAAGTAGTTAAAATGAAATTAGCTGTTATGCAAATATTATACACTCTGAAGTCTCCTCTTTT TTTAGTAAAATATTGTAGTTATGCAGCCAACAACAATAGATTAAGGATTAGTTAAGAGCGCTAATCCTGATTTCTGATTGCTTCTTCATAGAGCATAGTA AAGCGCCGGCATTGATCTTTTATGGATTTATCTGTATCTCTCTAATAATCAGTAATGTTGATGGTATCCTATCACACCAAACTTGTAAACTTTGTAGTTC TATAATATTCACATGTTTTCATTCAAATGAACAATTGTTGGCATGTGTGGATGTTGTGAATTTATTTTGCTTTAAAGATGTATAAGGTATTTATCTCATG ATCTGCTATTTACTTTTGGACCATCTCTTATTTCCAATATCAAGGATAAAAT
• Tissue: pods
• Gene name: LI_gene_128656;
• Additional information: details;

Expression of Ll_transcript_297638

FPKM

• PAB: 3.3
• PNAB: 4.4
• PS1: 4.8
• PS2: 3.7
• PS3: 4.5
• PW1: 4.5
• PW2: 5.5
• PW3: 3.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_297638

• Blastp: Elongation factor-like GTPase 1 from Homo with 37.99% of identity
• Blastx: Ribosome assembly protein 1 from Schizosaccharomyces with 37.43% of identity
• Eggnog: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)(COG0480)
• Kegg: Link to kegg annotations (79631)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415395.1)
• Pfam: Elongation factor Tu GTP binding domain (PF00009.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;