Ll_transcript_318112

• Id Trinity: TRINITY_DN37115_c0_g1_i3
• Name Transcript: Ll_transcript_318112
• Sequence: TTAGCATTATTACCGTATGTAATAAAAGCATAAAAAACCTGAAAGTGAAAATAACCCTATACCAATTCCGATCCCATATATCTATCTATCTTCAAAAAAC TTCATTCTCTGCTTTTGTTTCTAACATTCTCACTCCAAATTCTTCAGATCCAACAATGACTCTCAATCTTCGTCAAAAACAAACAGGTATATCATTTCTA TCTCTTCATTCTCTTCTCCGATTCACTCAAAATTCAAATCTCTATTTCTAAGATCCATTTCTTCATCTTTCTCTCAGAATGCATTGCGCGAATGCTCAAC CTGAATCAACCGATAAACGCAACTGGAACCGCTAACGAAGAAGTTTACAAGATCTTGATCTACGATAAATTCTGTCAGAACATTTTATCTCCGTTGATTC ATGTCAAGGACCTTCGCAAACACGGTGTTACTCTCTATTTCCTCATTGATAAGGATCGGAAACCGGTTCACGATGTTCCCGCGGTTTATTTCGTTCAGCC TAATCAATCTAATGTTCAGAGGATTGTTGCTGATGCTTCACGATCGCTGTATCAGAGTTTTCACCTTAATTTCTCAACCTCGATTCCGCGGCCTCTGCTT GAAGATCTCGCCTCGGGGACGATTAATTCGGATTCGATTCAACGGATTTCCAAGGTTCATGATCAGTACCTGGAGTTTGTTACGCTAGAAGATAACCTGT TTTCCTTGGCATACAAGTCTTGTTATGTTCAGCTTAATGATCCTTCGGCTGGGGACCGTGAAATTGAGGAGATTATAGAGAAGGTTGTTAATGGATTGTT TTGTGTTTTGGCTACTTTGGCAGTTGTGCCGGTTATAAGGTGTCCAAGGGGTGGTCCTGCTGAGATGGTTGCATCAGCATTGGATCAGAAGTTGAGGGAT CATTTGTTGTCAAAGAACAATCTGTTTACCGAGGGTGGGAATTTTGTTAGTTCATTTCAGCGGCCAGTGTTGTGTATATTTGACAGGAATTTTGAATTGC CGGTGGCAATTCAGCACGATTTTCGGTACCGGCCACTTATTCATGATGTACTTGGGTTGAAGTTGAATAGGTTGAGTGTGCAAGGGGAAAAGGGTGGGAT GAGGTCATACGAGTTGGATAGTTCAGACTCATTTTGGGTTGCAAATGGGGCACTGGAATTTCCTGAAGTCGCAGTGGAGATTGAGACACAGTTGAATAAA TATAAGAAAGACGTGGATGAGGTGAATAAGAGGACTGGTGGAACTCATGGTGCTGAGTTTGATGGAACAGACTTGATTGGTAACACGAAACATTTGATGA GTGCGGTGAACTCGCTGCCTGAGCTGACTGAAAGGAAGCAAGTAATTGATAAGCATACAAACATTGCTACTGTGTTGTTGGGTGAGATCAAGGAGAGATC ACTTGATTCTTTTGCTAAAAAGGAAAATGACATGATGGTTAGAGGGGGAATTGAACGTAATGAGCTTATTGGTGTGCTCAAAGGGAAAGGAACTAAGATT GATAAGCTTCGCTTTGCTATCATGTATCTTATTTCTTCTGAAACCATTAATCAGCCAGAAGCAGAAGCTGTGGAAGCAGCGCTAAGAGAGTCCGAGGTTG ATACTGCTGCTTTTCAGTATGTGAAAAAGATCAAGTCATTGAATGTTTCATTGGCATCGGCAAATTCTGCCAGCAGAAGTAATATTGTTGACTGGGCTGA GAAGCTCTATGGACAATCAATTAGTGCAGTGACAGCTGGTGTGAAAAATCTTTTATCTAATGACAGGCAGCTTGCATTGGCAAGGACAGTTGAAGCCTTG ATTGAAGGGAGGCAAAATCCCGAAACAGATTCGTACCTTTCATTTGATCCCCGTGCTCCTAAATCTGGTTCAGGAGCAAGTAGCGGCCATTTGAAAGGTC CCTTTAAGGAAGCAATTGTTTTCATGATCGGTGGAGGTAATTATGTTGAATATGGCAGTCTGCAAGAGCTTGCTCAAAATCAGCAGCCTCCGAAGCATGT TATATATGGAACAACAGAACTTCTAACCGGAGTAGATTTTGTAGAGCAGCTTACATTATTGGGACAGAAGATGGGTTTAGGTAATGTTGCTTCTACTTCT ACTCAGTAGTTCAGATGTGAATGTATTCTCTTTTCAGTTTGCCAAATTATTTTTAGTACCAAAAGAAACACTTTCAGACATTGAGGTAATACGGGCAAAA TCTGACTTTAATGTTTATTGCCTAAAAAAGGTTGAAGGATTTTGTGCTTTGCAGTGTCTCCTTGATTATAAAGCAAGGGGATTGCTGCTTGCTTTGTAGT TTTCTGTAGCACACCCTTTTATGCTTTGTTTTCATTGAAAAACATAATGTGGCTATAATTTCATTCTAGTAGTGACAAGCATGGTAGTTAGAATAGCGCA ATTCTAACCATGATATGATGCAGTTTCCATAGCTACCAATATCGCATTGTGTCTCGTTTCTGCACCAGAGTTCAAATTCTTCTTCTGTCTTTTCCATTAC TTCTCCAAAATGGTCAACAACAACAAGAATCTTGTAAGATATGATATAACACTTATAGCTTGATTGTGTTATTTCATTTGACAATTTTGCTGAGTTGGGT TAGTGGTTTGGGATTGAACTGCAAAACTGATTGAATTCAACTGAACCACACCAAAAAATGTGATTCATATATTTTCATAGTAGATCTTCACCAACACATA TGCATGAATTTTAACTGACATGACAAAATTTAGCATGTACCATTAAAAATGAATTGATGAATTTTAACTGACATGACAA
• Tissue: pods
• Gene name: LI_gene_128678;
• Additional information: details;

Expression of Ll_transcript_318112

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 1.1
• PS2: 0.2
• PS3: 0.8
• PW1: 0.4
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_318112

• Blastp: SEC1 family transport protein SLY1 from Arabidopsis with 79.44% of identity
• Blastx: SEC1 family transport protein SLY1 from Arabidopsis with 78.5% of identity
• Eggnog: Vacuolar Protein(COG5158)
• Kegg: Link to kegg annotations (AT2G17980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434006.1)
• Pfam: Sec1 family (PF00995.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;