Ll_transcript_417295

• Id Trinity: TRINITY_DN37218_c0_g1_i1
• Name Transcript: Ll_transcript_417295
• Sequence: ATTTAGGAGACTATGAAACGCTGTCGTTTTCTATCTTCTTCTTTCCATCATCGTGCTATACCCTATAAGGTTCGCAGTGCCATTGGTTTCTTCACTCTCA CATCGTTCTATAAGGTTCGCGATTTGTAGAAAAGCGTTAATCTTTGTGCATAGCATTGAAGCACTTGAAGGAAGATGCAGAATTTGGGAAATTTCAAGCT ACCACATTTCTTCAATTACCCACCTTATTTCACTTTGCAGCCAGTAAGAGACACTAGAGAGAAGCAGATACAACTATGGAAAGATCTTATTCTAGATTAC TGTAGAACGCAGAAGATATTTGTAATTGCACTTGAAGAAGAATTTCCTCTATTTTCAAATCCTGTAATTGAAAGGTCTCTTACTCATGAATCCAGAGATG CGTTTCTTTCAGCCTTAGTTTCTGAAGGACGTGCAGAATGGATGGATAAAGGACATAGGAAATGTCTTATTCTCTGGCACCGGATTCAAGATTGGGCTGA TATTTTATTGCAGTTTGCAAAAGATAATGGGTTGGAAGATGGTGTTGTAACGATAGAAGAAATACGCACAGGGATTGAATCTCAAGGAACAGGTAACCTG TTAATGTTTATAGTTCCTATTTGGTATCCGTAATTTATGATAGGACAATTTTGGCAATGATTTGCGGGTTCATCATATTTGTCTCATGAAGATGTCTTTG GTGCATGAGAGTATGGGATTATATTTTTAGGACTTGATAGTGATGTTTTTGGTAGGTCTTTTTAAAAAATTATTGCTTTTCAATTTGTTTCCGAAGTACA ACTTAATCTGGTTGTATCGTACCTTTTGGATGGGATTATGTATGTAGTTCATGTTAGTTTGGGGATAGATGGAAATTCGAATGGATGTATTTCCTTTCCT GCCCTCAGACTCTAGTAAAGATAAGATGAATGTCATAATGGAAGAGAACCAATATGGTAAAAAGGATTAAGCTGTAGTAAAAATGTTCAGTAATTTGTCA TTTATCCTTACATTCTTGTTGCTATTGAAGTTGTACTCAAAGAAGTTTATCTTTTTTTTTCCTGTCTTTCTTTAGGGAGACTTGAGAGTGTGCAAGCAAT GGAAGCAATACTAAAAATAAAAAATGTGAATTTTTTTTTGTATATACATAATTACGTGTATGTTTTTTGTGAGACATAAATATGTGAATTTTATGCGTGG TGCTTCCTGTTTAAACCTCATGTTCCAAACTTTTACTGATAAAGAAAAACCACAACATTTTCTTGATTACGACAGTGTACAATGTTTAACTCTCACAGCA GGTCAAATTGAAAGTCAACCATAATTGTCTAATTAGGTTAATTTTATTGTTAAAAGACAATACTAAGACATAAGTTGGTAAAAATATCTAAGATACAAGT TAGTAAAAATGCTAGGCTTGAACTTGGCATGAATGTGATGCCTCATACATAGTCTACTTCAATTTTAAGGTTTACTTACCACTGGTCACATTAGAGTTGT AATTTCTTGTTATAAGAAAACACTACCGGGTTTTGATTTATTTTTAAACTCGTAAGTGGGGTAGGAGACCATACATTACACACTGTAATGCAATCAAAAT AAAGTACAATTGATTCCAAAATAATGGATAGGTTTAAATGTTTACTTGTCACCACTGGTGTCTACACCATGATATCTGCTTTATATTTGAATAGTTTAAA AGAGAACACCCTAATCTATCATAACATATCTGTTGGATCATGGATGCCTATCACAATTCCGACCAATGATAAAAAAATTTGCCTATCGAACCCCCACCCC CTTTGATATAATGGAAAGTGACTTAGATTTTACTTCAGCTTGAGTTTTGCCACTTCTCCCACATGTTTATCAACTGTTCTTTTAAGGCTCTTTTTATTAC AATTACATTGTAGTTATTTCCTACATGCTAGGCTTTTCAATTGTTTCGACTGAAATTGGCTTACTCTTTTTGATATACTACAGAGCTTCATGGGATAGAC CGAACTATTCTCAATCGTGCTTTGAAACTATTAGAGCAGAAAGGGAAGCTTGTGGTTTTTAAAGGGACTTCGGCCGACGATGAAGGAGTCAAGTTTTCTT TATGATTGTTTTGTATATTAACCTGTTGAATCTTTAGGATCAACAGAGGGGAGGCTTTACCTGTGTCTGACTTGATGAATTTGTTGATGGGCAAGATGTT TAAGATCGAACTATTGTTGATCGCTACCATTTATCATTTCGAGATCCTCCTTATTTATGAGTGGTTAAAATTTTGAAATTTCTCTCTTTGAAATCTTGAG ATTACATAAAAT
• Tissue: pods
• Gene name: LI_gene_128771;
• Additional information: details;

Expression of Ll_transcript_417295

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.1
• PS2: 0
• PS3: 0.2
• PW1: 0.2
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_417295

• Blastp: Vacuolar protein sorting-associated protein 25 from Arabidopsis with 78.42% of identity
• Blastx: Vacuolar protein sorting-associated protein 25 from Arabidopsis with 78.42% of identity
• Eggnog: vacuolar protein sorting 25 homolog (S. cerevisiae)(ENOG4111F6Y)
• Kegg: Link to kegg annotations (AT4G19003)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422732.1)
• Pfam: ESCRT-II complex subunit (PF05871.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;