Ll_transcript_417296

• Id Trinity: TRINITY_DN37218_c0_g1_i2
• Name Transcript: Ll_transcript_417296
• Sequence: ATTTAGGAGACTATGAAACGCTGTCGTTTTCTATCTTCTTCTTTCCATCATCGTGCTATACCCTATAAGGTTCGCAGTGCCATTGGTTTCTTCACTCTCA CATCGTTCTATAAGGTTCGCGATTTGTAGAAAAGCGTTAATCTTTGTGCATAGCATTGAAGCACTTGAAGGAAGATGCAGAATTTGGGAAATTTCAAGCT ACCACATTTCTTCAATTACCCACCTTATTTCACTTTGCAGCCAGTAAGAGACACTAGAGAGAAGCAGATACAACTATGGAAAGATCTTATTCTAGATTAC TGTAGAACGCAGAAGATATTTGTAATTGCACTTGAAGAAGAATTTCCTCTATTTTCAAATCCTGTAATTGAAAGTAAGTTCGAAATTCGTGCCTTCTTGC CAATTTTTGTAAAGATTATTGAGTTGACAAGTCCTGGAAGCTCAATAATTTTTCTGTCTTGTTTGTTTCAACCTTTATGTCGTATGATTGTTTTCAAATT TTTGATAGTGCAGGGTCTCTTACTCATGAATCCAGAGATGCGTTTCTTTCAGCCTTAGTTTCTGAAGGACGTGCAGAATGGATGGATAAAGGACATAGGA AATGTCTTATTCTCTGGCACCGGATTCAAGATTGGGCTGATATTTTATTGCAGTTTGCAAAAGATAATGGGTTGGAAGATGGTGTTGTAACGATAGAAGA AATACGCACAGGGATTGAATCTCAAGGAACAGGTAACCTGTTAATGTTTATAGTTCCTATTTGGTATCCGTAATTTATGATAGGACAATTTTGGCAATGA TTTGCGGGTTCATCATATTTGTCTCATGAAGATGTCTTTGGTGCATGAGAGTATGGGATTATATTTTTAGGACTTGATAGTGATGTTTTTGGTAGGTCTT TTTAAAAAATTATTGCTTTTCAATTTGTTTCCGAAGTACAACTTAATCTGGTTGTATCGTACCTTTTGGATGGGATTATGTATGTAGTTCATGTTAGTTT GGGGATAGATGGAAATTCGAATGGATGTATTTCCTTTCCTGCCCTCAGACTCTAGTAAAGATAAGATGAATGTCATAATGGAAGAGAACCAATATGGTAA AAAGGATTAAGCTGTAGTAAAAATGTTCAGTAATTTGTCATTTATCCTTACATTCTTGTTGCTATTGAAGTTGTACTCAAAGAAGTTTATCTTTTTTTTT CCTGTCTTTCTTTAGGGAGACTTGAGAGTGTGCAAGCAATGGAAGCAATACTAAAAATAAAAAATGTGAATTTTTTTTTGTATATACATAATTACGTGTA TGTTTTTTGTGAGACATAAATATGTGAATTTTATGCGTGGTGCTTCCTGTTTAAACCTCATGTTCCAAACTTTTACTGATAAAGAAAAACCACAACATTT TCTTGATTACGACAGTGTACAATGTTTAACTCTCACAGCAGGTCAAATTGAAAGTCAACCATAATTGTCTAATTAGGTTAATTTTATTGTTAAAAGACAA TACTAAGACATAAGTTGGTAAAAATATCTAAGATACAAGTTAGTAAAAATGCTAGGCTTGAACTTGGCATGAATGTGATGCCTCATACATAGTCTACTTC AATTTTAAGGTTTACTTACCACTGGTCACATTAGAGTTGTAATTTCTTGTTATAAGAAAACACTACCGGGTTTTGATTTATTTTTAAACTCGTAAGTGGG GTAGGAGACCATACATTACACACTGTAATGCAATCAAAATAAAGTACAATTGATTCCAAAATAATGGATAGGTTTAAATGTTTACTTGTCACCACTGGTG TCTACACCATGATATCTGCTTTATATTTGAATAGTTTAAAAGAGAACACCCTAATCTATCATAACATATCTGTTGGATCATGGATGCCTATCACAATTCC GACCAATGATAAAAAAATTTGCCTATCGAACCCCCACCCCCTTTGATATAATGGAAAGTGACTTAGATTTTACTTCAGCTTGAGTTTTGCCACTTCTCCC ACATGTTTATCAACTGTTCTTTTAAGGCTCTTTTTATTACAATTACATTGTAGTTATTTCCTACATGCTAGGCTTTTCAATTGTTTCGACTGAAATTGGC TTACTCTTTTTGATATACTACAGAGCTTCATGGGATAGACCGAACTATTCTCAATCGTGCTTTGAAACTATTAGAGCAGAAAGGGAAGCTTGTGGTTTTT AAAGGGACTTCGGCCGACGATGAAGGAGTCAAGTTTTCTTTATGATTGTTTTGTATATTAACCTGTTGAATCTTTAGGATCAACAGAGGGGAGGCTTTAC CTGTGTCTGACTTGATGAATTTGTTGATGGGCAAGATGTTTAAGATCGAACTATTGTTGATCGCTACCATTTATCATTTCGAGATCCTCCTTATTTATGA GTGGTTAAAATTTTGAAATTTCTCTCTTTGAAATCTTGAGATTACATAAAAT
• Tissue: pods
• Gene name: LI_gene_128771;
• Additional information: details;

Expression of Ll_transcript_417296

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.3
• PS3: 0.2
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_417296

• Blastp: Vacuolar protein sorting-associated protein 25 from Arabidopsis with 72.6% of identity
• Blastx: Vacuolar protein sorting-associated protein 25 from Arabidopsis with 69.88% of identity
• Eggnog: vacuolar protein sorting 25 homolog (S. cerevisiae)(ENOG4111F6Y)
• Kegg: Link to kegg annotations (AT4G19003)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020237502.1)
• Pfam: ESCRT-II complex subunit (PF05871.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;