Ll_transcript_389589

• Id Trinity: TRINITY_DN37317_c0_g1_i1
• Name Transcript: Ll_transcript_389589
• Sequence: ATTGCTCGAAAAACGGAAGAGAAATATTGCGATTAATATTAGGTTTAAGTATAGTTTTCTTTCCAGCTATAAGATTAAGGTTTCAATTCCCGATTACTGT AACCACATTTGAAATCTAACAATGAAGAGCATGTATTGTTTGATGCCGCTTGAATTTTGAGGCATCCTTTTACAAACACGCCCTTTAAAAATTCATTGCT TATTGTTTGATAAGCTTACAAAATGAGAGTAAAAATTGTTACTTTCAGTGACCCAACTTCATAATCAAAGGTTTCTTCGTAGTATAAGCTCGAGAATGTT GATACAAAGGCATATATATCAGTCTTGTGTTGTTGCTTCAAGGAGCAGAAAAATTTCAACTTGGCCTCCTTTCTCTCAGAGATTAAAACAAACAGGGACA CCAACTTCATATCTGATTGTGTTGTATGGATTAAACTAGCAGAAAATGAGATTGTTCAAATGTTTCGGATGCCTAGTCCTCGAGAAGAAAATCATAACTT TCCTATAGAAGGAGGAAGGGTATTGAGCAATGGCCGTAATGCTCGGAAATTATTGGATGAGAGGTTCATCAGGATTTTGAAAATATTTAAATGGGGACCT GATGCAGAAAAGGCATTGGAAGTGCTGAAGCTGAAGGTTGATGCTCGCTTGGTTCGTGAAGTTCTGAAGGTAGATGTTGAGACCACTGTTAAAATTCAGT TTTTTAAGTGGGCTGGGAAGAGAAGACATTTTCAACACGATTCAACCACTTATATGGCTTTGATACATTGCTTGGACGAAAATAGGTTGTTTGGTGAACT GTGGAAGACGACACAAGAGATGGTTAAAAGTTCGTGTGCAATTGGTCCTGCTGAATTGTCTGAAATTGTGAAAATCTTGGGAAGGGCTAAAATGGTGAAT AAGGCATTATCTATCTTTTACCAGGTTAAGGGTCGTAAGTGCAGACCTACAGCAAGCACTTATAACTCTGTCATCTTTATGCTGATGAAAGAAGGGCATC ATGAAAAAGTTCATGAGCTGTATAACGAAATGTGCAGTGAGGGTCACTGTTTCCCGGACACGGTAACGTATAGTGTACTAATATCAGCATTTGCAAAACT AAATCGTGATGACTCTGCCTTTAGATTATTTCATGAGATGAAGGAGAATGGATTACAGCCCACGGCAAAAATTTATACAACTTTGATGGGAATATACTTT AAGTTGGGTAAGGTTGAGGAAGCTTTGAGGCTACTTCAGGAGATGAGAACATATCGATGTTCCCCAACTGTCTTTACTTATACAGAACTGATAAGGGGAA TGGGGAAATCTGGGAGGGTTGAAGATGCATATAGCACATACAAGAATATGCTGAAAGATGGTTGTAAACCTGACGTCGTTCTAATGAATAACTTGATTAA CATTTTGGGTAGATCGGATCACTTAAAAGATGCTTTTAAGATTTTTGGTGAAATGAAAATGCTGAATTGCACACCAAATGTTGTGACATACAATACCATT ATCAAATCTTTATTTGACGCTAAAGCTCCGCCTTCCGTGGCTGATTCATGGTTTCAGAGGATGAAAAAAGATGGAGTAGTCCCGAGTTCATTTACTTATT CAATTCTCATTGATGGTTTCTGCAAGACAAATAGAGTTGAGCAGGCTTTGTTGCTTCTTGAGGAGATGGACGAAAAGGGCTTTCCACCTTGTCCTGCTGC CTACTGCAGCCTGATCAATAGCCTCGGAAAAGCAAAACGCTATGAGGCTGCAAATGAGCTATTCCAGGAATTGAAAGAGAACTGTGGACATTCAAGTGCC CGTGTATATGCTGTAATGATTAAGCATTTTGGAAAATGCAGGCGACTCGACGAAGCTATCAGTCTTTTTAATGAGATGAAAAAGCTTGGATGCACTCCTG ATGTTTATGCTTATAATGCTCTCATGTCTGGGATGGTAAGGGCAGACATGTTAGATGAAGCTTTTTCAATATTCAGAACAATGGAAGAAAATGGTTGCAC CCCGGATATAAATTCTCATAATATTATCCTAAATGGTTTGGCTAGGACAGGTGGCCCGAAGCGTGCCATGGAGATGTTTACAAAAATGAAAAATTCTACT ACTAAGCCAGATGTAGTATCTTACAACACAATCCTTGGTTGTCTTAGCAGAGCAGGTATGTTTGAAGAGGCTGCAAAGCTTATGAAAGAAATGAGTTCAC AAGGATTGCAGTATGATCTCATCACCTACTCTTCCATACTCGAGGCAGTTGGGAAGGTTGATGAAGATCGTAATATGTTCGAGTCGTGAGAGTAACCTGG TATCACCATTTTGTGTGACTACTGTCAATGCTTATTAATCACATTACCCTTGAATTCAAGAATGATATTGAATGGAGTAAATCCATTTTTCTGAAGGTTT ATTAGGAACCATTAAGGAAAACCATGTGCAAATTTCTGTATAATCTGTTTGAAAAACTACAAAATAGTCACCCATGTATTATTTGTTTTGCACCTTGGAA AATATTATTGATCCCAACCTGAATAAGGAAATTTCTGCTATATTAATATTCCAACCGTTGAAAAAAA
• Tissue: pods
• Gene name: LI_gene_128862;
• Additional information: details;

Expression of Ll_transcript_389589

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.1
• PS2: 0
• PS3: 0.5
• PW1: 0.3
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_389589

• Blastp: Pentatricopeptide repeat-containing protein At3g16010 from Arabidopsis with 67.82% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g16010 from Arabidopsis with 67.97% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G16010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436424.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;