Ll_transcript_389590

• Id Trinity: TRINITY_DN37317_c0_g1_i2
• Name Transcript: Ll_transcript_389590
• Sequence: ATTGCTCGAAAAACGGAAGAGAAATATTGCGATTAATATTAGGTTTAAGTATAGTTTTCTTTCCAGCTATAAGATTAAGGTTTCAATTCCCGATTACTGT AACCACATTTGAAATCTAACAATGAAGAGCATGTATTGTTTGATGCCGCTTGAATTTTGAGGCATCCTTTTACAAACACGCCCTTTAAAAATTCATTGCT TATTGTTTGATAAGCTTACAAAATGAGAGTAAAAATTGTTACTTTCAGTGACCCAACTTCATAATCAAAGGTTTCTTCGTAGTATAAGCTCGAGAATGTT GATACAAAGGCATATATATCAGTCTTGTGTTGTTGCTTCAAGGAGCAGAAAAATTTCAACTTGGCCTCCTTTCTCTCAGAGATTAAAACAAACAGAAAAT GAGATTGTTCAAATGTTTCGGATGCCTAGTCCTCGAGAAGAAAATCATAACTTTCCTATAGAAGGAGGAAGGGTATTGAGCAATGGCCGTAATGCTCGGA AATTATTGGATGAGAGGTTCATCAGGATTTTGAAAATATTTAAATGGGGACCTGATGCAGAAAAGGCATTGGAAGTGCTGAAGCTGAAGGTTGATGCTCG CTTGGTTCGTGAAGTTCTGAAGGTAGATGTTGAGACCACTGTTAAAATTCAGTTTTTTAAGTGGGCTGGGAAGAGAAGACATTTTCAACACGATTCAACC ACTTATATGGCTTTGATACATTGCTTGGACGAAAATAGGTTGTTTGGTGAACTGTGGAAGACGACACAAGAGATGGTTAAAAGTTCGTGTGCAATTGGTC CTGCTGAATTGTCTGAAATTGTGAAAATCTTGGGAAGGGCTAAAATGGTGAATAAGGCATTATCTATCTTTTACCAGGTTAAGGGTCGTAAGTGCAGACC TACAGCAAGCACTTATAACTCTGTCATCTTTATGCTGATGAAAGAAGGGCATCATGAAAAAGTTCATGAGCTGTATAACGAAATGTGCAGTGAGGGTCAC TGTTTCCCGGACACGGTAACGTATAGTGTACTAATATCAGCATTTGCAAAACTAAATCGTGATGACTCTGCCTTTAGATTATTTCATGAGATGAAGGAGA ATGGATTACAGCCCACGGCAAAAATTTATACAACTTTGATGGGAATATACTTTAAGTTGGGTAAGGTTGAGGAAGCTTTGAGGCTACTTCAGGAGATGAG AACATATCGATGTTCCCCAACTGTCTTTACTTATACAGAACTGATAAGGGGAATGGGGAAATCTGGGAGGGTTGAAGATGCATATAGCACATACAAGAAT ATGCTGAAAGATGGTTGTAAACCTGACGTCGTTCTAATGAATAACTTGATTAACATTTTGGGTAGATCGGATCACTTAAAAGATGCTTTTAAGATTTTTG GTGAAATGAAAATGCTGAATTGCACACCAAATGTTGTGACATACAATACCATTATCAAATCTTTATTTGACGCTAAAGCTCCGCCTTCCGTGGCTGATTC ATGGTTTCAGAGGATGAAAAAAGATGGAGTAGTCCCGAGTTCATTTACTTATTCAATTCTCATTGATGGTTTCTGCAAGACAAATAGAGTTGAGCAGGCT TTGTTGCTTCTTGAGGAGATGGACGAAAAGGGCTTTCCACCTTGTCCTGCTGCCTACTGCAGCCTGATCAATAGCCTCGGAAAAGCAAAACGCTATGAGG CTGCAAATGAGCTATTCCAGGAATTGAAAGAGAACTGTGGACATTCAAGTGCCCGTGTATATGCTGTAATGATTAAGCATTTTGGAAAATGCAGGCGACT CGACGAAGCTATCAGTCTTTTTAATGAGATGAAAAAGCTTGGATGCACTCCTGATGTTTATGCTTATAATGCTCTCATGTCTGGGATGGTAAGGGCAGAC ATGTTAGATGAAGCTTTTTCAATATTCAGAACAATGGAAGAAAATGGTTGCACCCCGGATATAAATTCTCATAATATTATCCTAAATGGTTTGGCTAGGA CAGGTGGCCCGAAGCGTGCCATGGAGATGTTTACAAAAATGAAAAATTCTACTACTAAGCCAGATGTAGTATCTTACAACACAATCCTTGGTTGTCTTAG CAGAGCAGGTATGTTTGAAGAGGCTGCAAAGCTTATGAAAGAAATGAGTTCACAAGGATTGCAGTATGATCTCATCACCTACTCTTCCATACTCGAGGCA GTTGGGAAGGTTGATGAAGATCGTAATATGTTCGAGTCGTGAGAGTAACCTGGTATCACCATTTTGTGTGACTACTGTCAATGCTTATTAATCACATTAC CCTTGAATTCAAGAATGATATTGAATGGAGTAAATCCATTTTTCTGAAGGTTTATTAGGAACCATTAAGGAAAACCATGTGCAAATTTCTGTATAATCTG TTTGAAAAACTACAAAATAGTCACCCATGTATTATTTGTTTTGCACCTTGGAAAATATTATTGATCCCAACCTGAATAAGGAAATTTCTGCTATATTAAT ATTCCAACCGTTGAAAAAAA
• Tissue: pods
• Gene name: LI_gene_128862;
• Additional information: details;

Expression of Ll_transcript_389590

FPKM

• PAB: 1.5
• PNAB: 4.4
• PS1: 4.7
• PS2: 2.5
• PS3: 4.2
• PW1: 3.9
• PW2: 2.8
• PW3: 2.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_389590

• Blastp: Pentatricopeptide repeat-containing protein At3g16010 from Arabidopsis with 67.29% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g16010 from Arabidopsis with 67.29% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G16010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436424.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;