| Id Trinity | TRINITY_DN37456_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_294597 |
| Sequence | GTGATAGGAATAGAAAAAGCAAGATAGAACCCTAACTCCCTAAGTATCAAGAAAATAGTAGAAGCAGCTCAAAACAAAATATGTCAGCTGTTAAGAGATC ACTCCGCCAATTCACCTTCGGAACCGGCAAAACCGCCGGCCGCAACTCCTCCGGCCGAATCACCTCCTTCCACCGCGGCGGCGGCGCCAAACGCTTGCAA CGAACTATCGATCTCAAACGTAATGTTTCTTCCTCCATGGGCGTCGTCGAGAGGATCGAGTATGACCCTAACCGCTCCTCCAACATCGCTCTCATCCGCT GGCTCCAAGGTGTCAAGCCACAACTACCTCGCCACCGCCACTCCACGGAGGCGGAAACCTCTGCCGTGACTCCGCCGCGTAAGGTCATCGAGGCGGAACC ATCATCCGACATTCGCGGCGTGTTCGCGATTAACTCAATGTTGCCGCGCGTAGAAACAACCGCGAGGGACATTTTTCTCTCTACTTTTAAGAGAGGAGGT AAACGTGAAGGTGAACCGCTTGCTTTAGGGTTGCCGAGGATTGCGGTTGCGGCAGCGAAGCCAGAGTTCTTTGCGGCGCGTGAGAAAGGCGAGGAAGGGT TGTTGCAGGTGCGGAATTGGAAGAGGAACAGCGATGTGTGGAAGAATAGGAACAAACGTAAAGCGGCGATTTCTTGGCACAGCATTTGAAACCTAAAGAT GTAATGTTGAATTTATTATTATAATCATCGTTTGATTTTTGAAACTCCGTGTTTAGTTTTTATTTTTACTTTTAATTGTAGCTTAATTACTGGTTGGTCT TTAATTTTTAATTGGGATTTGTGTTTGTTTTTATGTTGAGGTATAAGGCATGGGTTGATGATGATTATATTTTAGGTTCTTCAGTTATTTGTTCATTATT TTGAAAGTTAATGTGAATTGGAACAGGAGTTGAATGATTTTTTTTAATTTTTCAATACAAGCAAGGTAGTGTTTGCTGTGTCGGCAAAACGGAGTGGTTA TGTTCTATTGGTTCCACCATTTTCCTTCAGAACATTTTAAACCCGTGTCATGTTCTTCTCATAAAATCCATATGGTTTGTTCCATCCTGTTATGACACAT TTACCAAGCATTACCTAAATTAGATGAGGTTAGAAATGGAAATTATGACTTCCCTTGGTTCATAGAAGCACAATAAGAATGGTAGGTGCTGTGAGGTTAC TCGGGATTGTGTTCTGTTTTATACTGAGGCATAAGGAATGTATGTGTAATGATGATAGTTTACATTTTTGCTGTGGTTTAGGAACTAAAATTGAGAGGAT TAGGAGTTGAATACCCAAATTCGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_128998; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_294597
| Blastp | 60S ribosomal protein L2, mitochondrial from Oryza sativa with 46.31% of identity |
|---|---|
| Blastx | 60S ribosomal protein L2, mitochondrial from Oryza sativa with 46.31% of identity |
| Eggnog | One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity(COG0090) |
| Kegg | Link to kegg annotations (6450181) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418837.1) |
| Pfam | Ribosomal Proteins L2, RNA binding domain (PF00181.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |