Id Trinity | TRINITY_DN37542_c0_g1_i1 |
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Name Transcript | Ll_transcript_491603 |
Sequence | GTTAGCTCCACATACCTGTAGATGTTCCTGACTCGGACAGGATTGCCTCCAGTGTGATGATACATATGTATCTTATGATCTCTTTTCTCCTTCATATCCT AGAATCTCTTAGAGACTTCTCTAACCATCTAAACTAGCCCCTAACTATTCCAACATCAACCTACAACATCTATTTAACTTCTCCAAATTTCTTCAAATAT CATCAACAAACACAAACTAAACATTCCACAAACAACCACTTTTCACTTTCTACTTCAAACACCAACCTTAGCCAATGGCTTTGTCTCCTTTTGCTTTGAA AATTTTGCATCAAAGGGTATCTATGTCTGTTTCCTCTTCATTGAAGAAGAGGTGGGGTGGTAATAATGAGTTTCTGAGAAGATTTTCTAGTGCAACAAAT GATAAGGGAAAATCTGAAGGCACTGAAGTTGTTGTATCTGAAGGCAAAAGGAATAGGTTGTTGCCTAAGAAGAAAGGCAACAGAAGATGGCTTTGGAGAA ATGATGAATATCACTTCCCTCCTGCCCTTAATGACTTCTTTCCTTCAAGCCTAGGGAATGCACTAATGCAAGCAACTAAGAACATCAACAATCTCTTTGA CACCATGAACATAACACCATGGTCACTGAATGGACGCATTAAGGAGAAAGTTGATCACTACAAATTGAGCTATAACATGCCCGGGATTTCGAAAGATGAT GTGAAGATCACAATTGATGATGGGTTATTGAGAATAAAGGGAGAACATAAGGAAGAAAATGAAGAAAAAGATGATAATGATGGTGATGAATATTGGTCAT CAAGTAGCTATGGATATTATAATACTAGTATTGTTTTGCCAAATGATGCCAAGGTTGATGAAATTAAGGCACAATTGAAAGATGGTGTTTTGATTGTGAC TATTCCTAGGAGTGAAAAGCCTAAAAATGATGTGAAAGAAGTTATTGTTCATTGATAGGATGTTTCTATTATGGAAACTTTATATTTTAATTATGCAAAT TAACTTGGTTTGTATAAAGAGTGTGCCAAGGTTGTGAAGATATGAAGAGTAGACATGAAGTTGTTATTGTGAACCTATGGTATTTATGATGTGTGTTGCT TTGGACCAAATGAAAAGAAAGAAATAAAATTTATGGCTAGTTAATTATTTC BLAST |
Tissue | pods |
Gene name | LI_gene_129085; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_491603
Blastp | 26.5 kDa heat shock protein, mitochondrial from Arabidopsis with 50% of identity |
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Blastx | 26.5 kDa heat shock protein, mitochondrial from Arabidopsis with 47.86% of identity |
Eggnog | response to heat(COG0071) |
Kegg | Link to kegg annotations (AT1G52560) |
CantataDB | Link to cantataDB annotations (CNT0001388) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442436.1) |
Pfam | Hsp20/alpha crystallin family (PF00011.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |