Ll_transcript_534312

• Id Trinity: TRINITY_DN37659_c0_g1_i2
• Name Transcript: Ll_transcript_534312
• Sequence: GGATGATATCTCTATTTTCAAACCCGTTGAGTTCGGGTTCGAGTTCGGATTTTGAATTTCGGGTTCGGGTTTTGGTTATGTACAAACCCGACCTCACCCC GCCCCGTTGCCATTCCTAACGGAAACGAAGCTCATACACAACACAACGTTGATTCGTGGGAATCAGAACACAATTCTTATTTACTACGAATTGTTGTAAG ACAACAATATTGATCCAGTGATGTGAATACTTCAATTCAACTTTGGATGAAGAAAACTCACATGAAAACCATAGCTTCTAAACTCTCTATTGCTCAACAC AAATGGATCATGCCCCATGTTCTTTTTTGTAGGTATCTGACTCAAACAAATCGAACCCATGATCATGCACATTCTATCCAGCATGAACCTTCAGTTGTAC AAACAGATATTACTCTATATGCCTCTGATTCAATCACTTTCCCAGTTGCCTGTCACATGTTTGAAGAAATGTCTGACTTAACTGTTGCATCAGCCACCAC TATAATTGGTGGCTTTACTAAACGGAACAGGCTTGATGATGCTATCTATCTCTTTTCAAGAATGCTTAACTCGGATATTAGGCCCAATGAGTTCACTTTT GGAACCGTGCTTCACTCCTCCACTGCGCTTAGAAATGTTCTTGTTGGTAGGCAACTTCATGGTTGTGCAATGAAGATGGGTCTTAACTCTAATGTGTTTG TTGGCAGTGCTCTTCTTGATTTCTATGTCAAGTTGAGTGCTATTGAAGAAGCACAGATGGCTTTCAGAGATACCCTATATCCCAATGTGGTGTCTTATAC AACTATGATTTCTGGGTATTTGAAGAGAAAGAGGTTTGAAGATGCTTTGTGTGTTTTCCAGGAGATGCCCGAGAGAAATGTTGTTTCTTGGAACGCAATG GTTGGCGGGTATAGCCAAACAGGCCACAATGAAGAAGCTCTGAATTTTTTTATTGACATGCTTAGAGAAGGGTTTATACCTAATGAATCTACGTTCCCCT GCGCGATTTGTGCAGCTGCAAATGTAGCTGCTCTAGGGATTGGGAAAACATTCCATGCATGTGCAATTAAGTTTTTGGGTAAGCTTGGTGGGTTTGTTGG TAATTCACTTGTCAGCTTTTATGCAAAGTGTGGAAGCATGGAAGACAGCCTCCTAATGTTTGAAAAACTTAGTAAAAGGAACACAGTTTCATGGAATGCT ATGATATGTGGTTATGCACAGAATGGAAGAGGTGCTGAAGCAATAAGCTTCTTCAAAAGAATGTGTGCTTCTGGCTGTAAACCCAATGGGGTAACCCTTC TTGGACTACTCTGGGCTTGTAATCATTCTGGTCTTGTTGACGAGGGCCTCTCATATTTCAATCAAGCTAGGCTTGATAACCCCAGTTTGCTAAAACCTGA GCATTATGCTTGTATGGTTGACTTGCTCGCTCGCTCTGGACGTTTTACGGAAGCCAAGGGTTTCCTTGACAGTATTCCTTTCGACCCCGGAATTGGATTT TGGAAGGCCTTACTTGGGGGCTGTCAAATCCACTCCAACATGGAATTGGGGGAGCTTGCAGCAAGAAAGATCTTGGCTTTGGATCCCAACGACGTGTCGT CATATGTGATGTTGTCAAATGCACATTCTGCAGCTGGTAGGTGGTCAGATGTGTCAACACTAAGGATGGAGATGAAGGAAAAAGGAATGAAGAGGATTCC AGGTTGCAGTTGGATTGAAGTCAAAGGCAACGTTCATGTCTTTCTTACTGCAGACAAGAATCATGTTGAAAATAATGAAATTTATGTGCTCCTGAGATTT TTCTATGAGCAATTAAGGGAAAATGAGGATTCCAATTTGGTTAACAATTTTTGCAATTTCGGTTCGTCATAAATAAAGGGTGTAATTCAGTTTTGTTTGA AGAGTATTCTATGATGAGCAAGATGAGACTGGCCATCCACCTGTCTTGCAGCGCAGGACCCTGCTTTCTGGCCACTTCAACTCCTCAAGGTTGAGCTGCA AAAGTTGCCATGAGAGTTCAGATTTGGCTGTTTACCTTGTATTTTATTTGTATGCCATTATGTCCTCCATAGTCGATACCATTTATTTCTGCATTCTTAT TTTTGCATCCAGGTCAAACTCTTATTTTTCAGGTGTTCACTGATAGCTGTGTATGACATGTTGAATGTCTTGTAGTTAACAAAGTATAGACTAGTGTTTA ATGTTTCTAATGTCATACGTTAAGTG
• Tissue: pods
• Gene name: LI_gene_129202;
• Additional information: details;

Expression of Ll_transcript_534312

FPKM

• PAB: 0.1
• PNAB: 0.7
• PS1: 0
• PS2: 0
• PS3: 0.4
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_534312

• Blastp: Pentatricopeptide repeat-containing protein At5g42450, mitochondrial from Arabidopsis with 56.61% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g42450, mitochondrial from Arabidopsis with 56.61% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G42450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451349.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;