Ll_transcript_534303

• Id Trinity: TRINITY_DN37662_c0_g1_i1
• Name Transcript: Ll_transcript_534303
• Sequence: GCCACTGACACATTCCGGGTAAGGGGTCAGATTATGCAAAAATTGGTTCATATTTTGGTTAATGGAGGAAGCACCCACAATTTCATAGAAGCAAGCATAG CTTATGACTTAGGTTTACAACACAGCCCAACGCCTACACTGCGTGTTATGGTAGGTAGTGGACAAGAATTAATCTGTTCTCATGTTTGCTTGGGGGTACA CGTGATGATCCAGGGCCATCTGTTTACGGTGGACCTCTATGTTCTGGGTTTGCGAGGTGCAGAAGTAGTTCTGGGAGCCTAATGGCTTAAGCAGCTAGGC CCAGTACTAATGGACTATCACTCTCTCACAATGAAGTTCATCCATCAAGGCACTCTCATTGATTTGCAAGGTGAGACATCTCCCATACCCTCCCCTCTCA GTTTACATCAGTTAAAAAAATTGACTCAAAATGACTCAGGCCCAATTTTGCTCACTAAAAGTCTATGGCTCAACCCATTCAACCCTCATATTATCATCCA CTTCCCAAACTGACCCAAGAATCCAAACCTTACTCCACACTACCATCAATTATTCGAAGAACCCTCCCATCCCCCTCCCCAACGAAACACAGACCATCAC ATAAACATTTTACCTAATGCCACTCCTGTGAATGTAAGACCTTATCACTACCCACATGCCCAGAAAACAGAGATTGAAAACCAAGTGGCCAAACTGTTGC GCACAGGGTGGATTTAGCCCAGTACTAGTCCGTTCTCATCCCCGATGCTCTTGATGAAAAAGAAGGACGGGTCTTGGCGTATGTGTGTTGATTACCGAGA CCTTAATGCCATTACTATTCGCGATCATTTTCCTCTGCCCACGATCGATGAGTTGCTGGATGAATTGGGAATGGCTCGCATTTTTTCAAAATTAGATTTG ACATCCGGGTTCCACCAGATCCGAATAGCTCCGGAAGATATTTCCAAGACATCATTTCGGACTCATGACGGTCATTATGAATATTGTGCTATGCCCTTTG GTTTGAGCAACGCGCCGGCAACCTTCCAGGCCACCATGATCAGGAAGTGCAACCTGTGAGTGGAAATGTCCAGCCCATGGATAGGCCCAAGAGGACTACC AAGCTGCCAAGTAAATTACAAGGCTACGTATTACCTAAATACAAATGATATTGCAAGTGTAATGAAATGAAATTCCTCTGGAAGCCTCTTTTATCTATTT AGCATATTACAGGGTGGAATTAGTTACGGGAATCATCCCTTTTGGGTGGAAGTTTGTTAGATGTCATCATTTCCTTT
• Tissue: pods
• Gene name: LI_gene_129205;
• Additional information: details;

Expression of Ll_transcript_534303

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0
• PS2: 0.2
• PS3: 0.2
• PW1: 0
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_534303

• Blastp: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 58.16% of identity
• Blastx: Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 53.38% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YIL082W-A)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_017426291.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;