Ll_transcript_276006

• Id Trinity: TRINITY_DN37744_c0_g1_i1
• Name Transcript: Ll_transcript_276006
• Sequence: TTCTACTGTCTTATGACTATATTATGTAGCGATTAATATCTGAAATCTCACAAAGCTAGGGTTCAGACCACAAAGAGTACACTGCTATGCTTCATAAAGC TTTGGAGGGTGCAATAATACTGGAATCTTTCCCCAAAACAACTGTGGATGTTTTTGCATTGGTGCTGGAATCGAGTGGCAGTAAGCTTACCATTTTGTAA TGGTTTTTATTTAATTCGTGATGGTAATGTATTTGATGGTTAGAAATTTTAAGATGAAGACGTGCTGAATATAAATTACCAAAAAATTAATAGAAAGGAT GTCTAAGTTAATGCTTGTTTACCTTGTTGTCTCTTGTTAAAGGCTTCACCCAAATTCTGTTCTCTTGTGTAAAGGTTAAAGGCCATTTTGTGTTGACTTG TATTTTCGCTTAGTTAAACATGGGGTGTAGCTCAGTTAGCAACCTAAGCTCCATGCTGGTTAATTTCACATATAGTTTAGGGATTTGAGTCCCACTAGCA GCACTGCCAACTCCATGCCATTAGATGCTTGTCTGGGGATTAGTCAAATACTTTTTGGGTGTGGGGAAACCTCATGAGAGACAAAAAGCATTTCTTTCAG TTGAACCACTCCTATAGGTTTTTGGTAAGGAATATTAACCACAACTCCTTTTTGTGTGAGCTCGTAATTGCTTATGATGAGAATTGATGCCGTGTGCTTA CTGTCTTCTACTATATCATTTAGCACGATACATTCGTTCTTTAATAAGGCTGGTGCTTTCGTCTCATTTTTTAAACATATGACTTCACCGTTTTTTACAG AGGCCTTAAACATAAATATTAAGACAGCGCTGCAGTCTTTTGTGATAGTCTGGTTCTTAGTGATTTTGTTTGAGATTCAGCTCTTCATATGCATATTCCT TTCGATTTTTTAATTTTAAGAACTTACGATGAATGATCCTATTTAAAATTTGGAGCAGTCAGAGGCACATTTAATTGAAACTTCTATGCAGAATATGATT TTCTGCCAAGTTTCTAGCAGTAAAAATACTCTCGAATTTTTGACAGGTGATCTCCCAGTTGTCATATCATGTGCTAGCCTTGCCCTGGCAGATGCTGGAA TAATGATGTATGACCTTGTTGCCTCGGTTTCAGTGTCATGTGTTGGTAAGAACCTTGTCATTGATCCTATTTTTGAGGAGGAAAACTACCAAGATGGAAG CTTAATGATTACTTGCATGCCTTCTCGCTACGAAATCACCCAACTCACAGTTACTGGGGAATGGTCCACCCCAAAGATTAATGAGGGAATGCAGCTGTGC CTGGATGCTTGTGCAAAGCTTGCTAAGATTATGAGGTCATGTTTGAAAGAAGCTGCATCTGATTCAAAGGAATAATGGGAAGGCCGAAGAGTTCCGGTCA AGCACACAGGTCACAAGATGTGCTGTTAAGTTGTTCTATCTTATTTTTTTGTTTTGTTTGGCTTTTCCTTCTGCTCAACATTGAGAGAGATTTTTTGTTG GAAGGGGTTAGGGAGGGAGAGATGCCTTGCCTTGCATGTCCTGCAAATTTTGTGCTTATGACTTTGTCAAAGAATGCTAAAAAGATTCTCATAGTGATAG GCATGGTCTGGTTCATCAAAAAAATGTTTGGGCCAATTTTATGTAAATAGAACTTGAATTTGCTATCACTTTGCTTCTGAAATATGCTTAGTCATTGAAC AAAACATTGATAAAGATTTGACAAAATTTTAG
• Tissue: pods
• Gene name: LI_gene_129278;
• Additional information: details;

Expression of Ll_transcript_276006

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.4
• PS2: 0.3
• PS3: 0.4
• PW1: 0.4
• PW2: 0.5
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_276006

• Blastp: Exosome complex component RRP41-like from Arabidopsis with 71.93% of identity
• Blastx: Exosome complex component RRP41-like from Arabidopsis with 71.93% of identity
• Eggnog: Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (By similarity)(COG0689)
• Kegg: Link to kegg annotations (AT4G27490)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413627.1)
• Pfam: 3' exoribonuclease family, domain 2 (PF03725.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;