Id Trinity | TRINITY_DN37972_c0_g1_i1 |
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Name Transcript | Ll_transcript_352564 |
Sequence | CAGAGAAAGAAAGCAGAGAAGAAACAGCAAGCAACAGAACATGTCAGTTTCAGCAATATTTGGTTGTAGAGTGATGATAGCACCAACCTCATTCGGAATC AACAATGTTAAGTCAATTCCAACCATCAACAACAACAACAACAATTACTGCGGTGGATTAACGATAGAGTGTTCTTCTCGGCCACAGAAAAAGGGAACAG CACATCATAAGAAGACAAGGCCACGGAAGACACAACCATGGGATATTAAGAAGAAACCAACGGTTTATGCTCCTTTGCCTCCTCTTCCTCCTGAATGGAG TTTTGTTATTTCTGCTGATGACTCATCTGATGTTACTTCTTCCACGGTTGTTCTTCAACCTGAATCTGATGTTGCTCTCGCTCCCTAGTTAGTGTCTTAT GTTAGTACCTTTTGTTATTGTTTAATGGATTGTTATTGCTACTCTTTTCGTCAATTTCGTGCTTTAATTATATTTGCTTATTTTTACATCTGTAAGTGAG AAACGCTTTACAAAATTATAGCACTAGTGTTATCTAGTATTAAAATTTAATTACTATTAAGTTTTAAATACAACAAATACCAACGGGTGTTGGTTTAAGT GGTAATTCCCTTAAGTAATGTCTCAGGGTCGAGTATTGTAGACGGAAAAAATGTGTTTTGGAGAGTTAGCCGGGTTGTTCTCGGCTTGGATAGGATTGAC TCAAATACAACAAAATGAATGGCTGATGACTCGTATAAATCTATAAACCAACTCTTTGGAACGTAAGACAACAGAACTGTTTCCACATTTTTGTTGTATA TTTGTATCACTCAAAGTTTGCATATATAGTTTATTAGTTGAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_129515; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_352564
Blastp | 50S ribosomal protein 6, chloroplastic from Arabidopsis with 55.88% of identity |
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Blastx | 50S ribosomal protein 6, chloroplastic from Arabidopsis with 59.78% of identity |
Eggnog | 50S ribosomal protein 6(ENOG410Y35U) |
Kegg | Link to kegg annotations (AT5G17870) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415512.1) |
Pfam | Family of unknown function (DUF5323) (PF17257.1) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |