| Id Trinity | TRINITY_DN37991_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_352561 |
| Sequence | TTTTTTTCTAGTTAATGGATTGGGCTAACGAAGACCGACCCCATTAGATTAGGGTCCAAATTGTTACACTTATGCACTTTGGACTCAAACCCCCGCACCA ACTTCTGAATACACTACAACACCCTCTCCTCCGTGCCAACGCCAGAAACGCCTCCACCAACCACCGTCACTTGTAGCCGTGCTGCCACCGTCAAAGGAAA AGTAGGAACACTATGTTATACATAATCGGTTTAGGATTAGGTGACGAAAAAGACATAACTATTAGAGGTTTGGAAGCTATAAAAAGCTGCACCAATGTTT ACATGGAAGCTTATACTTCTCTTCTTTCCTTTGGTCTCTCCTCCAATGGCCTTTCAAATCTTGTAAGTACCGTCCTTTTTTCTTTTTTCTCTTCATTTTC TTGTTCACTTATTATTTTTCTCTTCCACTTTTGTTTAGGAAAAGTTATACGGTAAATCCATTATTCTTGCAGACAGAGAAATGGTAGAAGAAAAATCTGA TGATATTCTTTCTGAAGCTCATAATTCTAATGTTGCTTTTCTTGTTGTTGGAGACCCTTTTGGGGCTACCACTCACACTGACCTAGTTGTTCGAGCGAAG AAGATGGGGATTGATGTGAAGATTGTACACAATGCCTCAGTGATGAATGCTATTGGAATCTGTGGTCTTCAATTGTATCGTTACGGAGAAACTGTTTCTA TACCGTTCTTCACTGATACTTGGAGACCTGATAGCTTTTATGAGAAGATTCAAACCAATCGAAACATGGGTCTTCACACACTGTGTTTGTTAGGTGTTAT TCTCAGTTCATGCTTTAAATTACTGCTTCTATGTTGTAACAACTAACAAGTGTTTGTGTTTATATATATCGATTATCGAACTTACTTTTACTTGGATGAG AAATTTAACAATAGATTTGTGTTCTGCACCGAACTTGGTGTATTCATATCAATAGTCCCCGGTCCTTACTATCATGCTGTAATGCTGTAGTCTAATACAG CTACTAGAATGAAGTAGTGTGATTATGTCGTAAGTGCTTGTTGATGCATATGTTGGTTAGCTGATAGTAACTCAAAACTTATTTATTACATTTTTGGAGT GGAATACCAAAGGCTAGAGTATGAATATCATTATTGATAAAAACTTATTTATTACATTATTGATAAAACTTAATCTAATTTTCAGTTTGTGATGGTTACA GATATTCGTGTGAAGGAGCCCACTCTGGAATCTTTAGCAAGAGGAAGGAAAATCTATGAACCACCCAGGTATATGACAATAAACACAGCCATTGAGCAGC TCCTGGAGATTGAGCAAGCGCATCAAGAATCTGCTTACGGGGAAGATACCGAGTGTGTTGGGTTTGCTCGCCTCGGAAGTGAAGATCAGGTGATAGTAGC GGGAACAATGAAAGAGTTGCAGACAATTGATTTTGGAGCACCTTTGCACTGCCTCGTGATAACCGGCAAGACCCATCCCTTGGAGGAAGAAATGCTGGAT TTTTACAGACGCGGGACGTAGTTAGTTACAATACAACATCAATATTCAAGACAACAGGACCATTTTGTTAACAAACAGATCCAAATTCCAATGTTTAGTA GATGCAGTCAAATTATCTGTAATTCATTTGTAGACACCAGTGCTTAACAACATGAATATTTTGGTTTTTTCTATGCTGATGCTTTTGAATGAAGTCTTTG ATACACAACAGAAATGTCTGGCACATTTGCCATTGAATTGGTGGTTAGTTTATTATGTGATATCCACTATTTGTGCAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_129534; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_352561
| Blastp | Probable diphthine methyl ester synthase from Arabidopsis with 76.42% of identity |
|---|---|
| Blastx | Probable diphthine methyl ester synthase from Arabidopsis with 77.5% of identity |
| Eggnog | S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF- 2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis (By similarity)(COG1798) |
| Kegg | Link to kegg annotations (AT4G31790) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431416.1) |
| Pfam | Tetrapyrrole (Corrin/Porphyrin) Methylases (PF00590.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |