| Id Trinity | TRINITY_DN37993_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_352500 |
| Sequence | CATGTGTCTTAGTGCCCAAGTAACACGTATTATATAAGGATATCCTTTACATTTCGAAAATCAAAATCATTCCCCTAATCTGTTTTCACTCCTTCTTCAA TTAATCAATCAAATCCTCAATTCCTCTGAATTTGAATCTCATGGGTACATCACAGAGCCGTGAAGGCCTCGAAGTCACCGACTCCGATTCCGATTACGAA GAAGAACAAGAACACTGCGAAGACGCCCAAACTAACACCGTTTCCAAACCTCAACTCGATGATATCGACGCAAAACTCAAAGCTCTTAAACTCAAATACT CCAATTCCCAAACTACCCCTCTTCCCGTTAACGCCGTCAAGCTTTACCTCCACATCGGTGGTAACGCTCCTAACGCCAAGTGGATCCTCTCTGATAAACA CACTTCCTACGCTTTCGTCAAAAACGACGACGATGGAGACCAAAACGACGACGATGAAACCGATTCGTTTTACGTTCTCAAGGTTGGGTCCAAGGTTCGT GCTAGGGTTTCAACCGAGATGCAATTGAAGATGTTTGGGGATCAACGTCGCGTTGATTTCGTCTCCAATGGCGTATGGGCTCTCAAGTTCCCCACTGATG AAGCGTATCGGAAATTCATCACTGAATTTCAGGATTGCATTTTCGAGAACGTGTATAATCTCGAAGCTACTGAAGAGAACAAGGTTAAGATTTATGGCAA GGAGTTTATCGGATGGGTGAAGCCTGAAGCTGCTGATGATTCAATGTGGGAAGATGCTGATGATTTTTCATCGGAAAAGGCGAAGACGCCAGTTAGGGAT AGGGAGAATTTGATGGAGGAATTTGAGGAAGCAGCGAATGGAGGGGTTCATAGTTTGAGTTTAGGTGCTCTTGATAACAGTTTTTTGGTAAATGACACTG GTGTTCATGTGTACCGGAATTTCGAACGTGGTATTCATGGGAAGGGTGTTGCTGTGAAATTCAATAGTGGGGATGGGAAGTTTTCGGATTTGGGAGAACA TACTCCGAATAAGGCGCTGTTGATGAGGGCAGAGACGAATATGATGCTTATGAGTCCAATGAATGAAGGGAAGCCACATGGTTCAAAGCTTCACCAGCTC GATATTGAGACTGGGAAGATTGTGAGTGAATGGAAGTTTGAGAAGGATGGTGTTGATGTTATGATGAGGGATATTACAAATGATACCAAAGGATCGCAGT TGGATCCTTCCGAATCGACATTTTTGGGGTTGGACGATAATAGGCTTTGTCAATGGGATATGAGGGAGAGGAAAGGAATGGTTCAGAGTCTGGCGATGGC GAATTCACCTGTGTTGCACTGGACCCAAGGGCATCAATTTTCAAGAGGGACTAATTTTCAGTGCTTTGCTACTACTGGAGATGGTTCAATTGTAGTTGGT TCGCTTGATGGCAAGATAAGGCTGTATTCGAAGACATCGATGAGACAAGCTAAGACTGCTTTCCCGGGACTTGGTTCCCCGATTACCCATGTTGATGTTA CTTATGATGGGAAATGGGTGTTGGGCACCACTGATACTTATTTGGTACTGATTTGTACCTTGTTTACTGATAAAGACGGAAAAACAAAGACTGGATTTAG TGGTCGTATGGGAAACAGGATTCCTGCTCCCAGGCTGCTGAAGTTGACTCCTCTGGATTCACATTTGGCTGGCGCAAACAATAAATTTCATGGTGGCCAT TTTTCATGGGTAATCAATTTTTTCCATTATTGTTAGACTTACATTCCTCTATATTTATTTATAGTATGACCTTAGAACAGATTCATGTTGAATCTTTCAT ATGACTACTTATATATGTCAAGCTTTGTGTCATCTTCAACTACAACATACTTTATTAATTGCCTTTGATTGATTTTTGTTAATCTAGCTTTTTTGTTGTA TCTTCTTATTATGGAAAACCTTTTGTTCATACTTCATACCTACATAATTCGTCGGTCGCAATTGTGCTTGCGATGTGGAGATCCTGAAATCCATAATGCC ATGGCTTCCATTGCAGTTTTCGACTGCATTTTAAAACCTCACTACTGCAAATTTTGTTTGGCCTTTTTCTTGTTATGAGGCTATTGTTTCTTGTAGTACT ATAGGTTTCTTACCATAAGAATGGAATTGCAACAGCTTGATTTTAGAGAGTTTTATCGTATTAGCCATTTCCGTGTTATGTCTTTCGTTGAAAGAAATTA GGTAAACTTTTCGCATAAAGGTTTGATCGGTGTACGGAAACTCTTAACAGAAATACCATCAATTAGTAGAAATAAATTTAGTCTGTGCCTACATGCCTCC TCTGGATCAACTATTTTATTGAACACTTTCCTTTACTTCTATTTATGAAGCTGTATACTTCGGATTTAGCTATTGATGAAAGATGATAACGTAGAGTTAT TGTGATCCATAATAGAACATTTTTTGAACCAAATTGTCACAGAAGTGGTCTGGTGGTACAAGACATTCAAGTGGTAGATTGAACAAAGATTGGTGAGTTG AATTGTTGAAATGATAACAGGTCCTTGGGTAGATTAGTAATGGAGGATATTTGAAAAATTGACAAAAGGATGCATGATTAAGGGGAATCGTGAAAGCAAG TATAGGATCACCATAGAGAGATCGTATGATATAACTTTTGACAGGTTCAGTAATTGAGTTGTTATAATGATTCAAAATCTTCTCCTATGTTTACACTGTT AAAGTGGGCAGAAATTATGAAATCATTTTACTAGCACGAACTTGAGAAAAAGACTGGAGTAAAAAGGAAATGTTTATATTCTATTCATCATGTAGGTATG GTAGCTTCCTTATGCACCTCTAAGTAGAAAAACTCCTTGCTTTTCCCATGTTGCATACTTCCATGTAATTAATTAGATACTTGAACAGTTGAAAACCTGA TGGCTTGCTTGTAGTGCGTGAGGATCTCACATTTGTTTTTCTTTCAGGTCACCGAGAGCGGCAAACAAGAACGCCACCTTGTTGCGACTGTGGGCAAGTT TAGTGTGATATGGGACTTTCAGCAGGTAAAGAACAGTGCTCATGAATGTTACAGGAATCAACAAGGGCTGAAGAGTTGTTACTGTTATAAGATAGTATTG AAGGATGAGTCAATTGTTGAATCACGATTCATGCATGACAAGTTTGCTGTTAGTGACTCCCCAGAAGCTCCTTTGGTGGTGGCAACTCCTATGAAAGTTA GCTCTTTCAGCCTCTCTGGAAAGAAACATGGTTAAATCTTTGTTTGTTTTTTAAATATTTCTTATAACATCTCAATTATTAGTGCTAGGCCTAGGAGTGT CTTGAAAATTGTATTTGCTTGTATTCAAGTATGCGTGTTGCTGTTTTTCTTTTGTATATTATGTTTCCATGTGTGATATTGCAAAGATGAAATTTGGGTA TAAACGCATTTCCTTGTGGGTTTTTATTTTTGGGCTCGAGATCTCGAATGGGTAGTTGGAGATTTGCTAGATTTCATGTGAAAAATTGTTGTCTTCTGGC AATTAAGTTGGTAGTATTTTCTTAACTTTCCTAGATCTTATTGTAAGTTAAAATGTTTTAGCATAAAACAGTTTTGAAATAAACAGTAAAAAACTATGTA TGAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_129536; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_352500
| Blastp | Protein CYPRO4 from Cynara with 75.87% of identity |
|---|---|
| Blastx | Protein CYPRO4 from Cynara with 75.87% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421702.1) |
| Pfam | VID27 cytoplasmic protein (PF08553.9) |
| Rfam | - |
| GO | - |