Ll_transcript_321082

• Id Trinity: TRINITY_DN38141_c0_g1_i2
• Name Transcript: Ll_transcript_321082
• Sequence: CAATCAACCAATATTTAAAAGTGGGACCCAATAAAAGGAAAGACATAGAAGGTGGAACTCTATCTTATCCTGGATAAGATTTTCCATTACCCACTTCTTC AGAATTCAGCTCAAACTCTCCCTACACCCACCGGAAAATCCTCTCTTCACACTAAAATCATCAATGGCGTTCTCAGCGCCGTTATGGTCTTCCACACTTC TCCCTAACAAAACCACCACCTTCCCTTCCAGACTCTCTCCCTCCATTCCCAAACCTTCTTCCACATTCGCCTTTCCCCCACTCTCCATCGCAGCCACCGC CGACTTCGACACCACCACCATCGCCGTCATCGGCGGAGGATCAGTCGCCGCCCTCGCCGCCGTCCTCTCCCTCACCGATCCCGAGAGACGCCGTAAGCTT CAGGCGGAGGAGGTTGGCGGCGGAGATAAGGAGGTGGTGAGGGAGTACTTCAACAGCACCGGGTTCCAGCGGTGGAAGAAGATTTACGGAGAGACTGAGG ATGTGAACCGGGTTCAGTTGGATATTAGGATTGGTCATGCTAAGACTGTGGAGAAAACGATTGAGATGTTGAAAGATGGAGGTTCGCTTCGGGGAGTGAC GGTTTGTGACGCTGGCTGTGGGACTGGTTCGCTTTCTATTCCTTTGGCGAAGGAAGGTGCTATTGTTTCTGCTACTGATATCTCTGCTGCTATGGTTGCT GAAGCTGAGAAACAGGTCCACTTTCTATTTATTTACTGAAAATGATATATCTTCCTATGAATGCTCGATATATTTCCTATGTTGAAACATTCGTTGTTAT AATTTATGTTAATGTTATTAAGGTGAATTATTATTTTCCATACCAGATGATAATTTCACGGGGAAATTAGATTGAGAACTCTCCTCGCAACTCCTATTTT AGAAATTACAGTTAACTCCTTTGAAGTTTATGATGAAACTTGTAACAGTTGCAGATGTCATATTAATCTGGGTGTGATGGCAACATTGACGTATTATTGA AACGAGGTCGGTGTGAGCTGTGAAGTATAACTAAGAAAAACCTCAACAATGTCATTTGGGGAAATTACATTGAAGTATAATTAAGCAAAACCTTAAGGAG ATTAATGTAATTTTCCTTAAAATTAATGTCGTGGTTGTGGTATACGATTAGATATAAATTGCAGAGGTAAGCTAGCTGTTCATTATGAGAGGATCGATGT TTAAATTTTAGAGATATTAACATTAACATGCTTGAGAGTTAGTTTTGCTGCAACAGTAAGGTGGCTTCATTTATGAACTGGAGGATATGACTGCGAATGT ATACATTCCCCATACCCCTCTAGGTGAGAGTTGCATGAATTGGGCCATTGTCGCCATTATAAATATTAACTCGCTGCGTGTGGTAAGTGAGTTGCACTCA ACGAGAAGACCAGAATGTAGGGCCTTTGTTTAGGATTCTAAAAAATGTAATTCCCCAAAAATGTTTGTGTCAAAAGCTGAATTTCAGAGGGTTCCTAGGT TAGTAACTAGATATTTCCAAGGGAGTAGTATCGAATTAGTGCTTGAGAGAATACCTTGACAAAATATATAAATGTGAACGCATAATGTAATTGTTTTTAT TCGCAGCAATACATTAGTTATATCTTGTTGTCGTTTGATGAAGTCAAGGAGCAGGTCTTTCATTTTTTACTTTGATTACACAGCAGGTAGTGGCTAGTAA CTACATTTTGATTTTCTGTTTCCTGCAGGCAAAAGAACAACTTGTAGCCAGTGAAGATGGCCCCTCACCAGCACCTGTGATGCCAAAGTTTGTAGTGAAG GATTTGGAGAGCTTAGATGGTAAGTACGACACAGTGGTCTGTCTCGATGTTTTGATTCATTACCCTCAAAACAAGGCGGATGGGATGATTGCCCACCTAG CATCGTTGGCCACCAACCGATTGATTCTGAGTTTTGCACCAAAGACATTTTATTATGATTTGCTAAAGAGGGTTGGAGAGTTGTTCCCTGGACCTTCAAA GGCAACAAGGGCATATCTTCACTCAGAGGCAGATGTAGAGAGGGCGCTGCGCAAGGTTGGCTGGACGATAAGGAAGAAAGGCTTAATCTCCACCCAGTTT TATTTTGCTAACCTTATTGAAGCTGTCCCTTTGTAATGAGAATTGGAAGTAAGTTTTGGATGCTATAATTATTTTATCTAGAGGAAATTCCTTATGTAAA TTATAAGGCCTTTTTTCTTTTGCTTTTGTATGCCACGATTCCCTGCACGTAATTATATTTTATATATTTCTTTGAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_129697;
• Additional information: details;

Expression of Ll_transcript_321082

FPKM

• PAB: 4.7
• PNAB: 1.7
• PS1: 1.3
• PS2: 0.8
• PS3: 1.6
• PW1: 1.2
• PW2: 1.8
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_321082

• Blastp: Magnesium protoporphyrin IX methyltransferase, chloroplastic from Arabidopsis with 73.21% of identity
• Blastx: Magnesium protoporphyrin IX methyltransferase, chloroplastic from Arabidopsis with 76.64% of identity
• Eggnog: Non-specific O-methyltransferase that catalyzes the 2 O- methylation steps in the ubiquinone biosynthetic pathway (By similarity)(COG2227)
• Kegg: Link to kegg annotations (AT4G25080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463149.1)
• Pfam: Methyltransferase domain (PF13649.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;