| Id Trinity | TRINITY_DN38155_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_321137 |
| Sequence | CCAGAGAAAGGAGCCAAAAGAATTAGGTGAATTGCCAAGAGTGCAAATTCCTAATTTGCCTAATTTGAATAGCTATCTAGAGCACTGGGGAACTCATCCA ATCACTCAAAATAGAACTCTTTATACATGGATCAATGAAGAAGGAATACCAGTATGCCAGAGGACATATCGAGAACAGCATTTTAACGCTTCTTGCATTG CTCATAAGCTCTTAACAAGCCGAAAGCCAGTTATCAAGCCTGGGGACAAGGTTCTTCTAGTCTATGTCCCTGGTATGGATTTTGTTGATGCCTTCTTTGG ATGCATAAGAGCTAAAGTGATACCAGTCCCAGTTCTTCCTCCAGATCCCATGCAAAGAGGTGGTGGACAAGCACTGATGAAAATAGAAAATATTGCCAAG TCATGCGGCATAGTGGCAATTTTATCATCAGTAGCTTATCACTCAGCAGCCCGTGCAGGTTCGCTGAAAAATCTCATCTCATTAGCTGTAAAAAATGGGA AATCTTCAGCTCGGTGGCCGAATCTTCCATGGCTGCACACTGATACATGGGTCAAGAACTCCAAAAGTATGGTTTTGGAGCATCTATATGATCAAAGTGA ATCTCAACCCGGTGATATATGTTTCTTACAATTCACGTCCGGTTCAACTGGTGATGCTAAAGGAGTCATGATTACTCATGGTGGGCTTATTCACAACGTG AAGTTGATGCGAAGTAGATACAAGAGTACCTCAAGGACAGTGCTAGTAAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGGGGACTTTTTACAT CTCTTGTAAGTGGTGGATCAGCAGTTTTATTTTCACCACTGACATTTATCAAGAAACCACTGCTATGGCTTGAAACTATCAGCAAGTATAAAGCAACTCA TAGTGCGGGCCCTAACTTTGCCTTTGAGTTACTGATTCGAAGATTGGAGTCTGACAAGGACAAGCTTCAAAAGTTAGACCTTTCATCCTTGACTTTCCTC ATGGTTGCTGCTGAACCAGTGAGGCAGAAGACTCTCAAAAGCTTTATTAAGCTTACCAGTCCTTTTGGCTTGTCTGAAAAGGTGATGGCTCCTGGATATG GCTTAGCAGAAAATTGTGTCTTCGTAAGTTGTGCATTTGGAGAAGGTCGGCCTATTATTATTGATTGGCAGGGAAGAGTTTGTTGTGGGTATATTCACCC AGAGGATGCAGATATTGATATCAGAATAGTTGATCCAGAGACTTGCGAAGAGGTTCAGAAAAATGGAAAGGAAGGAGAAATTTGGGTTAGCAGTCCTAGT GCAGGAATAGGATACTGGGGAAGGGAAGAATTGAGTCAGACAACCTTCAGGAATGAGCTTGAAAATCGTCCTGGACGTAAGTACACAAGAACCGGAGACT TGGGACGAATAATAGATCAGAAGTTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGGAATATTTACTCAGCAGATGTTGAAAAGAC AGTTGAGAGTTCTTCTGAAATTATTCGTCCTGGTTGCTGTGCTGTCATTGGTGTACCTGAGGAAGTTTTATCAGCAAAGGGGATTTTGGTTCCAGATGGT TCTGATCAGGTTGGCTTGGTTGTGATTGCTGAAGTAAGGGAAGGTAGATCGGTTAGCAAAGATGTGATTGAGAAAATTCAGACTCGTGTAGTAGAAGAAC ACGGAGTCAGGGTCGCTTCTGTCAAGTTGGTAAAGCCTAGAACCATTGGAAAAACAACATCAGGAAAAATCAAAAGATTTGAATGTATCAAACAGTTCAC AGATGAAACACTGAACTTGGCACCACAAAGTCCACAACCTTTTTTGATAAAGAAATGTTTGGTACGGCCATTTAGTACAGGGATATGCAAAGAAGGGAAA ATGCCTAGGCCCCAGTTAATGAGTAGGATGCCTCAAACACCTAGGAAAAGGATCAGTAACAATGAAATTATGGACTTCTTGAAAGGGCTTATTTCTGAGC AGTCTGGAATTCCAATCAGAAACATCTCAGTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_129712; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_321137
| Blastp | Long-chain-fatty-acid--AMP ligase FadD28 from Mycobacterium with 32.27% of identity |
|---|---|
| Blastx | Long-chain-fatty-acid--AMP ligase FadD28 from Mycobacterium with 32.5% of identity |
| Eggnog | Amp-dependent synthetase and ligase(COG0318) |
| Kegg | Link to kegg annotations (MMAR_1765) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449722.1) |
| Pfam | AMP-binding enzyme (PF00501.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |