| Id Trinity | TRINITY_DN38188_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_321161 |
| Sequence | GGCAAGAAGTGCTCATTTGGCCAAGACAACTTGGAGTATTTGGGACATGTTATTTCAGCATTGGAGTATCCACAGATCCTAAGAAGGTGGAGGCAATGTC ACTATGGCCCACACCCAAGGATGTCACCAGCTTAAGGGAATTCTTAGGACTTACCGGCTATTACAGGAGGTTCGTTCATAATTATGGAAGAATAGCAAGA CATTAACCAACCTGCTAAAGAAAAATGCTTTCCAATGGAATCCAGAGGCGCAAACTGCCTTCGAACAACTTAAGCAAGCGATGACCAAATTACCTACATT AGCAGTGCCTGACTTTTCAAAGCCTTTTGTAGTTGAAACTGATGCTTGTGGAACCGGATTGGGGGCCGTTCTAATGCAAGAAGGAAGACCCCTTGCCTTT TGGAGCACCACCCTATCAGAAAGGAATCAAATGAAATCAGTTTATGATCGCGAATTGAGGGCGGTTGTGAAAGCAGTTCAGAAGTGGCGACACTACTTGT TGGGGAACCATTTTATTATTAAAACTGACCAAAAAAGTTTGAAAATTTTGACAGATCAAAGAATGCTTAGCGAAGAACAATATAAATGGATTTCCAAATT GACAGGATACAATTTTAAAATACAGTACAAACCGGGAAAGGAGAACTCGGCAGCAGATGCCTTATCGAGAAGAAGTTCCTATTGTGCCATGTCAATCTTA CAAATTCATGATTTCGAGGAATGGGCAGAAGAGGTCAAAAAAGATAAAAAGTTACAAAAATCATGCAAGACATGATCATTGATCCCACTTCTCATGCCGA CTATACCTTGCGGGATCAGAAGTTATTCTTACAAAAGAATAGTAGGTCTAGTTTATTGGGAAGGGATGAGTCCTGACATAAAAAACTTTGTTGCTGCGTG CGAAGTGTGCCAAAGGAACAAAAGTGACAACTTATCTCCAACATGATTACTACAACCTTTACCAATTCCCACACAGGTTTGGACATACATTTCTATTGAT TTTATTGGAGGGCTGCCTAAATCTATGGGGAAGGATACAATTCTTGTAGTGGTTGATTGACTCACCAAATATGCTCATTTCGTACCATTAGGGCATCCCT ACACTGCTATTGAAGTTGCAGCTGTCTTTTTACAAGAAATAGTAAGAGTGCATGGGTTCCCGTCATACATTGTTTCAGATCGTGATCCTTTGTTTTTAAG CAATTTCTGGAAAGCACTTTTTAAAGCAGCAGGTACACAGCTAAAATTCAGTTCAGCATATCATCCCCAAACCGACGGACAAACGAAAGTTGTCAATAGA TGCTTGGAAGTTTATTTACGATGCTTGACAGGTACCAAGCCTAAGAAATGGGTGTCTTGTCTTCCCTGGGCAGAATTCTGGTTCAACACCAATTATACTG CTTCAAGTAAAATGTCACCCTTCAAAGCTTTGTATGGACATGATCCCCCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_129742; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_321161
| Blastp | Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 46.03% of identity |
|---|---|
| Blastx | Transposon Tf2-8 polyprotein from Schizosaccharomyces with 30.85% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_015964281.2) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |