Id Trinity | TRINITY_DN38241_c0_g1_i2 |
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Name Transcript | Ll_transcript_325229 |
Sequence | TTTCATTCGATGTTCAAGGGTTCTTCTTATCTCCTTCCCAATCTTCCAAGAACAACCATGATTATATGCAACTCCATTACTTTCAATTACAACCCATGTT TCTCTTTCACTAATTTCTACCCTTCATCACTCCCACTTTCTCTTCAAATTAAGCCCTCAAAATCACTCTCACTAATTGTGAGTGCTCGTAAGAAAAACAA CACAGATGATAGCCATAGCTCTGTACCCAAACCTGATGAATCCACTGGCTTCTTCCCTGAAGCTGTTCTTCTTAAAAAGAGGACAGTTGAGGAAGATGGT AAGGCTCTTCCGGAGTTTGAAGACGATGAAGAAAGACAACTCTTTGAATCACTGATGCTTGATGTCGAAACTGACATGAATGTGGAACTAATGCGCCACT ATGAGGTTATGTACTTAATTCATGAGAAGCATGTAGAAGAGGTTGCTGCTGTCAATGAGAAAATCCAAGACTTTTTGAGAGAGAAGAAAGGCAGGGTGTG GAGACTGAATGATTGGGGTATAAGAAAGCTGGCTTACAAAATACAGAAAGCCAAAAGCGCCCACTATATGCTGATGAACTTTGAGTTGGAGGCGAAATCG ATCAACGACTTCAAGACTCTATTGGACAAAGATGAAAGAGTTATTAGACATCTTGTGATAAAGAGGGACGAGGCAATCACTGAAGACTGCCTTCCTCCTC CATTGTTTTCTGGAAGTGCCGATGACTCTGATGACGAAGATTACGAAGACTGGGATGATGAAGACGAGATGGATGACTCTGATGACGAAGATTACGAAGA CTGGGATGATGAAGACGAGATGGATGACT BLAST |
Tissue | pods |
Gene name | LI_gene_129799; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_325229
Blastp | 30S ribosomal protein S6 from Alcanivorax with 42.86% of identity |
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Blastx | 30S ribosomal protein S6 from Alcanivorax with 42.86% of identity |
Eggnog | Binds together with S18 to 16S ribosomal RNA (By similarity)(COG0360) |
Kegg | Link to kegg annotations (ABO_2191) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419062.1) |
Pfam | Ribosomal protein S6 (PF01250.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |